Shewanella frigidimarina: Sfri_1113
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Entry
Sfri_1113 CDS
T00395
Name
(GenBank) radical SAM enzyme, Cfr family protein
KO
K06941
23S rRNA (adenine2503-C2)-methyltransferase [EC:
2.1.1.192
]
Organism
sfr
Shewanella frigidimarina
Brite
KEGG Orthology (KO) [BR:
sfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sfr03009
]
Sfri_1113
Enzymes [BR:
sfr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.192 23S rRNA (adenine2503-C2)-methyltransferase
Sfri_1113
Ribosome biogenesis [BR:
sfr03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Sfri_1113
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RlmN_N
Radical_SAM
Motif
Other DBs
NCBI-ProteinID:
ABI70966
UniProt:
Q085U9
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All DBs
Position
1313849..1314970
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AA seq
373 aa
AA seq
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MSVKKINLLDLDRKGLRALFSEMGEKPFRADQLMKWVYHFGVTDFEEMNNINKVLRTKLA
AKCEIVAPEIASFQKSNDGTIKFAINVGQGQEVETVYIPEEDRATLCVSSQVGCALECTF
CSTGQQGFNRNLTVSEIIGQVWRVSQFLGFHKDTGDRPISNVVMMGMGEPLLNLANVIPA
MDIMLDDFGFSLSKRRVTLSTSGVVPALDKLGDAIDVALAVSIHAPNDELRDVLVPVNKK
YPLQEFLAGIRRYLEKSNANRGRVTVEYVMLDHINDSTDQAHELAILMKDTPCKINLIPF
NPYPGSPYGRSSNSRIDRFSKVLMEHGLTVIVRKTRGDDIDAACGQLAGDIRDRTKRLAK
KQMQQNQISVTME
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtaaagaaaatcaatttattagatcttgatcgtaaaggactacgggcgttgttc
agtgaaatgggcgaaaaaccgtttcgtgccgatcagttaatgaagtgggtttatcacttt
ggtgttactgactttgaagaaatgaacaacataaacaaagtgttgcgtaccaagcttgca
gcaaagtgtgaaatagttgcgcctgaaattgcgagttttcaaaagtcgaatgatggcact
attaaatttgctatcaatgttggccaaggccaagaagttgaaaccgtatacattcctgaa
gaagaccgtgcgaccttgtgtgtatcatcacaagtcggctgtgctttagaatgtactttc
tgctcaacgggccaacaaggttttaatcgtaacttaacggtatctgaaattattggccaa
gtttggcgtgtatcgcaatttttaggtttccacaaagatactggcgatcgaccaatttct
aacgtagtgatgatgggtatgggtgagcctttgcttaaccttgctaacgtgatccctgcg
atggatattatgctagatgattttggttttagtttatctaaacgtcgagtgacgttatca
acttctggtgtagtacctgcacttgataaattaggtgacgccattgacgtcgcactagcg
gtaagtattcatgcacctaatgatgaactgcgcgatgtgttggttccagttaataaaaaa
tatccattacaagaatttttagcgggcattcgtcgctatttagaaaagtctaatgcaaat
cgcggccgcgtgacggttgaatatgtcatgcttgatcatattaatgacagcacagaccaa
gcgcatgaactcgcgatactaatgaaagatactccatgtaagattaacttaatcccgttt
aacccgtatcctggttctccttacggtcgttcatctaactcacgcatagatcgtttttct
aaagtgttgatggaacatggcctaacagtgattgttcgtaaaacccgtggtgatgatatt
gatgctgcttgtggccaattagccggtgatattcgtgatagaacaaagcgtttagcaaaa
aaacaaatgcaacagaatcagatttcagtcacaatggaataa
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