Shewanella frigidimarina: Sfri_1149
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Entry
Sfri_1149 CDS
T00395
Name
(GenBank) transcriptional regulator, TetR family
KO
K18301
TetR/AcrR family transcriptional regulator, mexJK operon transcriptional repressor
Organism
sfr
Shewanella frigidimarina
Brite
KEGG Orthology (KO) [BR:
sfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfr03000
]
Sfri_1149
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
sfr01504
]
Sfri_1149
Transcription factors [BR:
sfr03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
Sfri_1149
Antimicrobial resistance genes [BR:
sfr01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
Sfri_1149
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TetR_N
TetR_C_7
LacI
HTH_22
HTH_Tnp_1_2
HTH_6
FrhB_FdhB_C
Membralin
UPF0122
Sigma54_CBD
HTH_40
HTH_10
Motif
Other DBs
NCBI-ProteinID:
ABI71002
UniProt:
Q085R3
LinkDB
All DBs
Position
1358846..1359526
Genome browser
AA seq
226 aa
AA seq
DB search
MLNGLIYGTNMTKKNTSLNNIEQISLSRSEQKRAQVLESAIDLFCHQGFPNTSMDEVAKH
AGVSKQTVYSHFGSKDDLFVSAIESKCVVHQLTGDALIDAANPQRVILQFALQFGEMIVS
KETMTVFKTCVAQADTHPEVSRLFYDAGPKHVLGLIRNYLKKVNEHGEYFFENPHESAVR
LCLMLFGELKLRLELGLEIGDLLTTRQQYLQDTAGMFLRAHQVDVK
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atgcttaatgggttaatttacggaaccaacatgacaaaaaaaaacacatcgcttaataat
atcgaacagattagtttgagccgcagtgaacaaaagcgtgctcaagtacttgagtctgcg
attgaccttttttgtcatcagggttttcctaataccagcatggatgaagtagcaaaacat
gccggagtatcaaaacaaactgtttactctcactttggctccaaagatgatttgtttgta
tctgcgattgagtctaaatgtgttgtacatcaactcactggcgatgccttaattgatgca
gcaaatccacaacgggttattttgcagtttgctctgcaatttggtgaaatgattgttagc
aaagaaaccatgactgtatttaaaacttgcgtagctcaagctgacactcacccagaagtg
tctagattgttttatgacgcaggccccaagcacgtactcggactgattagaaattactta
aaaaaggtcaatgagcatggcgaatacttttttgaaaatccacatgaaagcgcagttaga
ctatgtttaatgttatttggcgaactaaaattacgtctagagttaggcttagaaataggt
gatttgctgacaaccagacaacaatacttacaagatactgccgggatgtttttgcgagcc
caccaagttgacgtaaaataa
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