Shewanella frigidimarina: Sfri_1611
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Entry
Sfri_1611 CDS
T00395
Name
(GenBank) sugar-binding protein, putative
KO
K10439
ribose transport system substrate-binding protein
Organism
sfr
Shewanella frigidimarina
Pathway
sfr02010
ABC transporters
sfr02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
sfr00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Sfri_1611
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
Sfri_1611
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sfr02000
]
Sfri_1611
Transporters [BR:
sfr02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
Sfri_1611
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
B12-binding
SIS
PucR
EIIA-man
Motif
Other DBs
NCBI-ProteinID:
ABI71462
UniProt:
Q083V3
LinkDB
All DBs
Position
complement(1917217..1918227)
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AA seq
336 aa
AA seq
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MGRSLVLFFFLTLTLISSVHGKEWKLAVVPKFHSVFFDQSKAGCIDAAAQIKGVECIYRG
PDISNVRMQDQVINQLIDEGIDGIAVAITQSNYLVKNSLNRAKEAGIPIITYDSDIEASI
NEDPNSIRLAYIGTDNFELGKSLGEELKKHRPNGGTLIMQSGRPDSPNLNLRLMGVRSAL
SGKIYDKPPGELLNNDSGWTEVREPFFNFDQLAQSVNQMESVMKGKPVKADSFIAVGGWP
QNDQARYRKMIAPYQAKINNNKIIIVITDTSSEQLTMLKDNLVHINIGQDPYEMGKQAIL
TLYKIVTEQKYDKIIYTPITFCTPENVNTCTKVSGL
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
gtggggagatcacttgtattgttttttttcttaactctaacactcatatcttctgtccat
ggaaaagaatggaaactcgctgtggtacctaaatttcatagtgttttttttgatcaaagc
aaagctggctgtatagatgccgctgctcaaataaaaggcgtggaatgcatatatcgtgga
ccagatataagtaatgttaggatgcaagatcaggtaataaatcaactgatcgatgaaggt
atagatggtatcgctgtagccattacacaatctaattatctcgttaaaaatagccttaac
agagctaaagaagccggtatcccgataattacctatgactctgatattgaggcttcaatc
aacgaagaccctaatagtatacgcctagcctatataggcactgacaattttgaattgggt
aagtcattaggtgaagaattaaaaaaacatcggcccaatggcgggacgctaataatgcaa
tctgggcgaccggattctcccaatctgaatttaagactgatgggggtccgttccgcatta
tcgggaaaaatatacgataaacctcctggagaattgcttaataacgattcaggatggact
gaagttagagaacctttctttaattttgatcaactggctcaatctgttaatcaaatggag
tctgtaatgaaaggtaagcctgtaaaagcagactcttttattgctgttggtggttggccg
caaaatgaccaagcacgttaccgtaaaatgattgccccgtaccaggcaaaaattaataac
aacaagatcatcattgttattacggatacatcctctgaacaattaacgatgttgaaagat
aatcttgttcatatcaatattggtcaagacccatatgaaatgggaaaacaagccattttg
acgttgtataaaattgtaacagaacaaaaatatgacaaaataatttacacacctatcaca
ttttgcacaccagagaacgttaatacatgtaccaaggtttcgggattgtaa
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