Shewanella frigidimarina: Sfri_1625
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Entry
Sfri_1625 CDS
T00395
Name
(GenBank) Vault protein inter-alpha-trypsin domain protein
KO
K07114
Ca-activated chloride channel homolog
Organism
sfr
Shewanella frigidimarina
Brite
KEGG Orthology (KO) [BR:
sfr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sfr02000
]
Sfri_1625
Transporters [BR:
sfr02000
]
Other transporters
Pores ion channels [TC:
1
]
Sfri_1625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VIT
VWA_3
VWA
VWA_2
VIT_2
VWA_CoxE
Motif
Other DBs
NCBI-ProteinID:
ABI71476
UniProt:
Q083T9
LinkDB
All DBs
Position
1934361..1936529
Genome browser
AA seq
722 aa
AA seq
DB search
MRPLFLISHLSIKNVCKSLCFGLLFVIYASITTAFASPSGYQEDDITQGTLEYFQQNQVI
QAFALDTQVSMDVSGLLNRVTVKQVFINDSDQWVNGRYLFPLPENAAVDSMQLRIGDKVI
AGQIQPKKQALQTFENAKKQGKQASLLQQQRRNLFTSDVANLGPHEQLVVEISYQQKVEY
RDGLFSLRFPLAITPRYNPQADRTTEQPLLAMPSSANTATSAKHVRPALDVKMQVNIDAG
FELTSLDSLYHPIKQSNVGNHYSVNFAGKQIADRDFVLQWQANVGAVPKAATFYQTGKTH
LADNSDERSETAQRQPNPVDNNMYSLVMLMPPSVEVSEQHLIARELILVIDTSGSMSGQS
ITQAKQALQFALAGLRDIDSFNIIEFNSDVTMLSATPLSANSRNIGKANRFIQSLDADGG
TEMRSALQTALVDSVQQDSDQTDAHSEMLRQVIFMTDGAVGNEHELYQLINDQLGDSRLF
TVGIGSAPNSDFMRRAATMGRGTFTYIGNESEVQQKIEQLLNKIEQPVLTNIGLYYLDGS
VPDYWPTTISDLYQNEPLWVSIKSASHQQQPIIVSGSINGQYWQQQLDFEENQAAKGIDL
LWANAQITSLELYKDNASRDRVNKQVEALGLLYHLVTSQTSLVAVDVTPVNPLVDNPIDV
QLQPHMPHGLNAAQSSQVLPQTGTASRLWLLIGFSLLGLGLLHYLWLRQRLPGQLLVIES
HD
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atgcgcccgttgtttttaatctcacatttgtctattaaaaatgtttgtaaatcgctgtgt
tttggtttgttgtttgtcatttatgccagtattacaacggcatttgcatcaccgtctgga
tatcaagaagacgatatcactcaaggcacattagagtactttcaacaaaatcaagtgata
caagcttttgcgctagatacacaagtgagcatggatgtgtcgggattactcaatcgggtc
actgttaagcaagtgtttatcaatgattctgatcaatgggtgaatgggcgatacttattc
ccgttacctgaaaatgcagcggtcgatagcatgcagttacgcattggcgacaaagtcata
gcaggacaaattcaacctaaaaaacaagcattacagacttttgaaaacgccaaaaaacaa
ggtaaacaagcgagtttgttacagcaacaacgacgcaatttgtttacctcagatgtggcc
aatttagggccacacgaacaactcgtggtcgaaattagttatcaacaaaaggttgagtat
cgtgatgggctgtttagtttacgttttccattagcgataacaccgcgttataacccgcaa
gctgatcgcactaccgagcagccgctattggccatgccatcgagcgctaatacggcgacg
tctgctaaacacgtcaggcctgcactagatgtaaagatgcaggtgaacattgatgctggt
tttgaactaacctcgttagacagtctctatcatccgattaagcaatctaatgtaggtaat
cattacagtgtgaactttgccggcaaacaaattgccgaccgtgattttgtattgcaatgg
caggctaatgtaggcgcagtaccaaaagcagcgacgttttatcaaaccggtaaaactcat
ttagcagacaatagcgacgagcgttcagaaacagcacaaagacaacctaatccggttgat
aacaatatgtactcgctagtgatgttaatgccgccgagtgtggaagtaagcgagcaacac
cttattgccagagaactgattttagttatcgatacgtctggttctatgtctggccagtct
attactcaagctaagcaagcattacagtttgcactagcgggactgcgtgacatcgacagc
tttaatattattgaatttaatagtgacgtaacaatgttatctgccacgccattgtctgct
aatagccgtaatattggcaaagcaaaccgatttatccagtcattagacgctgacggcggc
accgaaatgcgcagtgcattacaaactgcgctggtggacagcgtacagcaagattctgat
caaaccgatgcccacagtgaaatgctacgccaagtgatttttatgaccgacggtgccgtt
ggcaatgaacatgagttgtatcagcttattaacgatcagttaggtgacagccgattattt
acggttggtattggctctgcgccgaactcagattttatgcgccgagcagcaacaatgggg
cgagggacatttacctatattggcaatgagtctgaagtgcaacaaaaaattgaacaatta
cttaataaaatagagcaacccgtgctgaccaatattggcttgtattatcttgatggcagc
gtaccagattattggccgaccaccattagtgatttataccaaaatgaacccctttgggta
agcattaaatcggcgtcacaccaacaacagcctatcatagtgtctggcagcattaatggt
cagtattggcagcaacaacttgattttgaagaaaaccaagcagctaaaggcattgattta
ttatgggcaaatgcgcaaataacatcacttgagctttataaagacaatgccagccgcgac
cgcgttaataagcaagttgaagcattaggcttgctgtatcacttagtgaccagccagacc
agtttagttgctgttgatgtgactccggttaacccattggttgataatccaatagatgtg
cagttacaaccgcatatgccccatggattaaatgcagctcaatcgtcgcaagtattacca
caaaccggtaccgctagtcgattatggttattaattggctttagtttattaggcttagga
ttgttgcactatttatggttaagacaacgcttaccaggccaattgttagtgattgaatca
catgattaa
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