KEGG   Shewanella frigidimarina: Sfri_1727
Entry
Sfri_1727         CDS       T00395                                 
Name
(GenBank) helicase c2
  KO
K03722  ATP-dependent DNA helicase DinG [EC:5.6.2.3]
Organism
sfr  Shewanella frigidimarina
Brite
KEGG Orthology (KO) [BR:sfr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sfr03400]
    Sfri_1727
Enzymes [BR:sfr01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     Sfri_1727
DNA repair and recombination proteins [BR:sfr03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    Sfri_1727
SSDB
Motif
Pfam: Helicase_C_2 DEAD DEAD_2 ResIII Helicase_C T4SS-DNA_transf DUF4031
Other DBs
NCBI-ProteinID: ABI71577
UniProt: Q083I8
LinkDB
Position
2034612..2036537
AA seq 641 aa
MSSTLTQSVIHEFSDRGALAKHVHHYHHRQSQTDMAVAVSDAIAKKHNLILEAGTGVGKT
YAYLIPALLSGKQVVVSTGSKNLQEQLFLKDLPALLAMLDVHVPIALLKGRNNYLCQLRL
EKQMQNASQFSEYYIDDLLKINQWAHLSKDGDIGNLTSVAEHSEVIPSVVSTKETCTGKK
CDHYDVCFTRKARIRAMEAKVVVVNHHLFFADRLLKDTGFAELLPDPDVVIFDEAHLVPD
ICINYFGSHISSREIDLLLNGIIKIHKQVIRDSIQIEQLSQRGLVALSDWHNAMYDNQVS
DWRKVLANKQLATVSWALQQSLADLANVLRHHLGREDLLDLAFEQLHELAEKLQDYFECK
DMQAAYSVELGPRFIMLRLSPINVAKQCQQLFDAKTRWIFTSATLQVNRSLGHFATELGL
SSAKQIILDSPFDYPNQAVFCVPRHLGKVGQSQHTVKQLVDVCVQAINAAQGRTFILFTS
HQMLEQVASALQGKVAYPLLVQGQASKQSLLNKFRQLGNAVLLGTSSFWEGVDVRGKLLS
CVIIDKLPFVSPDDALYKARAANAERQGLDPFSHISLPQAVISLKQGVGRLIRDEKDRGV
LILCDNRIVNRAYGQAFINSLPPMQRTRDLDLALQFLKQIP
NT seq 1926 nt   +upstreamnt  +downstreamnt
ttgagctctacacttacccaatctgtaatccatgaatttagcgatcgcggcgcgttagcc
aaacatgtgcatcattaccaccaccgacaaagtcagaccgatatggccgtcgcggtaagt
gacgctattgctaaaaagcataatctgattttagaagctggtactggtgtgggtaaaacc
tatgcgtatttaattccggccttactcagcggtaaacaagtggttgtgagtactggcagt
aaaaacctgcaagagcagctatttcttaaagatctccctgcattactcgccatgttagat
gtacatgtacctattgcattattaaaagggcgtaacaattatttatgtcagttacgccta
gaaaaacaaatgcaaaatgccagtcaatttagcgaatattatattgatgacttgctaaaa
attaatcaatgggcacatttgagcaaagatggcgatatcggcaatttaacctcggtggca
gagcattcagaagttattcctagcgtagtgagcactaaagaaacctgtacgggtaaaaaa
tgcgatcattatgatgtgtgttttacccgtaaagcacgtattagagcaatggaggccaaa
gtggtggtggttaatcaccatttattttttgctgaccgattgctaaaagacaccggattt
gccgagttattgccagatcccgatgtggttatttttgatgaagcccatttggtacccgat
atttgtatcaattattttggcagtcatatatccagtcgcgaaatcgatctgttactcaat
ggcatcatcaaaatacataaacaggttattcgtgacagtattcaaatagagcaattatcg
caacgtgggctggtggcattaagtgattggcacaatgcgatgtatgacaatcaagtgtca
gattggcgtaaagtgcttgccaataagcaattagcaaccgtgtcatgggcattacaacaa
tcattagcagatcttgcgaatgtgcttcgccatcatcttggccgcgaagacctgctcgat
ttagcgtttgaacaattacacgagcttgctgaaaagctacaagactattttgaatgcaaa
gacatgcaagcggcttatagtgtcgagttaggcccacgttttatcatgcttcggcttagc
cccattaatgtggccaaacaatgccagcagctgtttgatgccaaaacccgttggattttt
acctcggcgaccttgcaagtaaaccgaagtttaggccattttgcgaccgagcttggctta
tcatccgcgaagcaaattattttagacagtccgtttgattaccctaatcaagcggtattt
tgtgtgccgcgccatttaggtaaagtagggcagtcgcaacatacagttaaacaattagtt
gatgtgtgtgttcaagctatcaacgccgctcaaggccgtacgttcatattgtttactagt
catcaaatgctcgaacaagtggcatccgctttacaaggtaaagtcgcttatccattattg
gtacaaggccaagccagcaaacaaagtttattaaataaatttagacaattaggtaatgca
gtgttgctcggcaccagcagtttttgggaaggagtcgatgttcgcggtaagttactcagc
tgcgtgattatcgataaattgccgtttgtatcgccagatgatgctttatacaaagcacgg
gccgctaatgctgaacgccagggacttgatccctttagccatatttctctgccacaagcg
gtgataagtttaaagcaaggagtcgggcggctaatacgtgatgaaaaagatcgcggtgtg
cttattttgtgcgataaccgtatcgtaaatcgtgcttatggacaggcgtttattaattcg
ttgccaccaatgcagcgcacacgtgacttagacctagcattacaatttttaaaacaaatc
ccttaa

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