Shewanella frigidimarina: Sfri_1788
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Entry
Sfri_1788 CDS
T00395
Name
(GenBank) alpha amylase, catalytic region
KO
K01187
alpha-glucosidase [EC:
3.2.1.20
]
Organism
sfr
Shewanella frigidimarina
Pathway
sfr00052
Galactose metabolism
sfr00500
Starch and sucrose metabolism
sfr01100
Metabolic pathways
sfr01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
sfr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
Sfri_1788
00500 Starch and sucrose metabolism
Sfri_1788
Enzymes [BR:
sfr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.20 alpha-glucosidase
Sfri_1788
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Gene cluster
GFIT
Motif
Pfam:
Alpha-amylase
Malt_amylase_C
SusG_C
hDGE_amylase
PLU-1
Alpha-amylase_C
SPDY
Motif
Other DBs
NCBI-ProteinID:
ABI71638
UniProt:
Q083C7
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All DBs
Position
2104478..2106112
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AA seq
544 aa
AA seq
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MDQVTWWRGGVIYQIYPRSLMDSNGDGVGDLQGIIAKLDYIASLNVDAIWISPFFKSPMK
DFGYDISDYLEIDPLFGTMADFDQLIEKAHQLNIKVVIDQVLSHTSDQHHWFEQSRQSRD
NDKADWYVWADPKDDGSAPNNWLAIFGGCAWEWEPRRQQYYLHNFLKSQPDVNFHCPQVR
QAVLDNVEFWLKKGVDGFRLDAITFCYHDEQLRDNPAKPKDKRQGRGFSEDNPYAYQYHY
YNNTRPQTVGFIEELRALINRYPGAVTLGEVSSEDSLATMAEYTQGDDRLHMAYSFELLT
DDFSAAYIRQTVEELEASIGDGWPCWAIGNHDVKRVASRWGKDSVNPTMVKMLNAMLFSL
RGSVCSYQGEELGLTEAPIEFSQLQDPFGIAFWPMFKGRDGCRTPMPWVKEAPNAGFSDA
TPWLPIDPLHNNSAVDVQEADQDSILNSYRHFLLWRKQQNILIEGDIQFIDSHADVLAFI
RSKDQQRILVLFNLSAAQQTFDLKELPLSSILEGHGLLSGAQDKQHPATIVLPSFASFYG
LLGK
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atggatcaggtaacctggtggcgcggtggagtgatatatcaaatctatccacgcagttta
atggattctaatggtgacggtgtcggcgacttgcagggcatcattgctaaacttgattat
attgccagtttaaatgttgatgcaatttggatttcgccttttttcaaatcaccaatgaaa
gactttggttacgacattagtgattatcttgaaatcgacccactgtttggcaccatggcc
gactttgaccaacttattgagaaagcccatcaactaaatataaaagtggtgattgaccaa
gtactcagtcatacctcagatcaacatcattggttcgagcaaagtcgtcaaagtcgtgat
aatgataaagccgattggtatgtatgggccgatccaaaagatgatggcagtgcgcctaac
aattggctcgctatttttggtggttgtgcttgggaatgggaaccacgccgtcagcaatac
tacttacataattttcttaaaagtcagcctgatgttaatttccattgtccgcaggttcgt
caagctgtgctcgataatgttgaattttggcttaaaaaaggcgttgatggtttccgtcta
gatgcgattacattctgttatcacgatgaacaattacgtgataaccctgctaaaccaaaa
gataagcgtcaaggccgtggcttcagtgaagataacccttatgcttaccaataccattac
tacaataatactcgcccacaaacagttggttttattgaagagttacgtgcattaattaat
cgttaccctggcgcggttactttaggtgaagtgtcatctgaagattcacttgccacgatg
gctgaatacacccagggtgatgaccgtttacacatggcctacagttttgagttgttaacg
gatgactttagcgcggcttatattcgccaaaccgttgaagaactggaagccagcattggt
gatggttggccatgttgggctatcggcaatcatgatgtgaagcgtgttgcatctcgttgg
ggtaaagacagtgttaacccaacaatggtgaaaatgctcaatgcgatgttgttttcatta
cgtggcagtgtgtgtagttatcagggtgaagaattaggcttaactgaagctccgattgaa
tttagtcaattacaagatccattcggaatagcgttttggccaatgtttaaaggccgtgat
ggatgtcgcacgccaatgccttgggtaaaagaagcgcctaatgcaggttttagtgacgca
acaccttggctaccaatagatccgttacacaataatagtgccgtagatgtacaagaagca
gatcaagattcaatactgaacagttatcgtcattttttactgtggcgcaaacagcaaaat
atcctgattgaaggtgatattcagtttattgatagccatgctgatgtattagcgttcatc
cgcagcaaagatcaacaacgaatattagtcctgtttaacttatctgcagcgcaacaaacc
tttgacctaaaagagttacctttatcttcgatcttagagggccatggtttactcagtggc
gcgcaagataaacagcatccagcgaccattgtgttaccaagttttgccagtttttatggt
ttgcttggaaagtag
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