Shewanella frigidimarina: Sfri_1920
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Entry
Sfri_1920 CDS
T00395
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase
KO
K07259
serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:
3.4.16.4
3.4.21.-]
Organism
sfr
Shewanella frigidimarina
Pathway
sfr00550
Peptidoglycan biosynthesis
sfr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sfr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Sfri_1920
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sfr01002
]
Sfri_1920
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sfr01011
]
Sfri_1920
Enzymes [BR:
sfr01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
Sfri_1920
Peptidases and inhibitors [BR:
sfr01002
]
Serine peptidases
Family S13: D-Ala-D-Ala peptidase C family
Sfri_1920
Peptidoglycan biosynthesis and degradation proteins [BR:
sfr01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
Sfri_1920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S13
Beta-lactamase2
Peptidase_S11
Motif
Other DBs
NCBI-ProteinID:
ABI71766
UniProt:
Q082P9
LinkDB
All DBs
Position
complement(2273286..2274950)
Genome browser
AA seq
554 aa
AA seq
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MNSILFCLPQPRFFHKQPSLRFTQALCLLGAFITSSLPNVSLAAEVPSQVALSQQQTINS
DNINQQPTALYLDNMLQLLKPAHSQLGITVWDMTTQKTVFEYNNQSLMQPASVQKLLTAL
AATKQLGKDFIYQTRLTTLAQQPLDKSLIENGIYSGDIYIEFSGDPTLKYQDLRQLLASL
SQLGITELTGNIVLTSEQDSQLQAPGWVWDDLGICYAAPISPFIIDKNCVYGRLATTGYN
KVANITMMGNRPIEISNDAYFVTPIVNRPVAKPAVQTLTDAVVLPAYLTESVPQCQLTLS
RFDNNRYHLSGCHVGAKSLPLAIAITEPQLYAQQIVAKQLASLGIVHQLPITASIMNTEA
QFMAQRQVIASHQSAALPQLLETMLLKSDNLIADSLLKKLGEVYYQAPSDFARSGQALKT
ILYSIGIDLSNANIADGSGLSRYNLLTPEHVLSVLTTLYQQPEYRFLLELLPQSGVSGTL
RYKRYFNKSPLKNHVFAKTGSMLGIANLAGRVNVSNGHDYLFVLFENGLSPQIKKQQKAP
FSAVFLQTMMDVPR
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atgaattccattcttttttgtctcccccagcctcgtttctttcataaacaaccatctttg
cggttcactcaagctttatgtctgctaggagcatttattacctcaagcctgcccaatgta
tcgctcgcagcagaagtccccagccaggtagcactgagtcagcaacaaacaatcaatagc
gataatattaaccagcaacctacagcattgtatcttgataatatgctgcagctactaaaa
ccagcacattcacagctaggcatcacagtgtgggacatgacgactcaaaaaacagtattt
gagtacaacaatcaatcgttaatgcagccggcaagtgttcaaaaactattaaccgcattg
gctgcaactaaacaactcggtaaagactttatttaccaaactcgcttaaccacgttagcc
cagcaacctctggataaaagtttgattgaaaatggcatatattctggcgatatttacata
gaatttagtggcgatccaaccttaaaataccaagatttgcgacagttacttgcctcttta
agtcagttaggtattactgagcttacggggaatattgtattaaccagcgagcaagatagc
caactgcaggcgcctggttgggtatgggatgatttagggatctgctacgcggcgccaata
tcgcctttcatcattgataaaaattgtgtctatggtcgattagcaacaacgggctacaat
aaagtggccaacatcaccatgatgggaaatcggcccattgaaatcagcaatgatgcttat
tttgtcaccccaattgtcaaccgacctgtcgctaaacccgctgttcagacattaactgat
gcggttgtgcttcctgcatacctcacggaatcagtaccacagtgtcaattaacgttaagt
cgtttcgataataatcgctatcatctgagtggctgtcatgtcggggctaaatcgttacct
ttagcaatagctattaccgaaccacaattgtacgcgcaacagatcgtagccaaacaattg
gcttctttaggtattgtgcatcagctacccattacagcaagcataatgaacacagaagcg
cagtttatggctcaaagacaagtcatcgccagccaccaatctgcagccttgcctcagtta
cttgaaaccatgttgctcaaatcagataatttaattgccgacagtttattaaaaaaattg
ggtgaggtttattatcaagcaccaagtgactttgcccggagtggccaagcattgaaaacc
attctgtattcaattggcatcgatttatcaaatgcaaacatcgctgatggctctggtttg
tcgcgttataatttactcacgcctgaacacgtattaagtgtacttactaccctataccaa
caacctgaataccgcttcttactcgagttgttaccacaatctggtgtaagtggtactttg
cgctataaacgctatttcaataaatctccgttgaaaaaccacgtgtttgctaaaactggc
agtatgctgggcattgcaaacttagcgggacgagttaatgtaagtaatggtcatgattat
ttatttgttttattcgaaaatgggttaagtccgcagattaaaaaacaacaaaaagcgcct
ttttcggcggtgtttttgcaaaccatgatggatgtcccaagataa
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