Shewanella frigidimarina: Sfri_1960
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Entry
Sfri_1960 CDS
T00395
Name
(GenBank) Mammalian cell entry related domain protein
KO
K02067
phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
Organism
sfr
Shewanella frigidimarina
Pathway
sfr02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
sfr00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Sfri_1960
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sfr02000
]
Sfri_1960
Transporters [BR:
sfr02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
gamma-Hexachlorocyclohexane transporter
Sfri_1960
Phospholipid transporter
Sfri_1960
Mce system transporter
Sfri_1960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MlaD
ATG17_like
DUF347
Clat_adaptor_s
Motif
Other DBs
NCBI-ProteinID:
ABI71806
UniProt:
Q082K9
LinkDB
All DBs
Position
complement(2329859..2330842)
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AA seq
327 aa
AA seq
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MSKSQRLPLAIGAFIFGAIILVFIALLFFSGGRIFAEKAPVVMFFNSSVQGLQVGAPVKL
KGVIIGEISDISIDFPNDSSQGVTAAVHADLLLKRINIKGIQVGEEFFSHAIDNGLRAQL
NYLSLLTGLLYVELDFFPNTSPVFHGEKDQLLELPTIATDFESLSKDLQSLNLKSLVNNV
DNLAQQLSDIAASGKIQQALDNFDNAAKAVKSTAINLDNTQAALGKNGLEVLLKLDNLLV
QLNHDEPKFVESLNHSLTELRSTLLSINQLANQAGNTLDQNSPLLIELTNTLEEIRRTAR
SLRSLSETLDEQPEAIIRGKKALPLGE
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaagccaacgacttccgctcgcgattggtgcctttatatttggcgcaattatc
ttagtgtttattgcattactgttcttttccggtgggcgtatatttgcagagaaagcccct
gtagtgatgttttttaacagttctgtgcaagggttacaggtaggcgcaccggtaaaatta
aaaggggtcataataggtgaaataagcgatatcagtatcgatttccccaacgacagtagc
cagggtgtcacggctgcggttcatgccgacttattgttgaaacgtatcaatataaaaggg
atccaagtaggtgaagagtttttttctcacgccatcgataacggcttacgcgcccagctg
aattatctgagtttactcaccggactgctatatgttgagctggatttctttcccaacacg
tcaccggtatttcacggagaaaaagatcaattattagaattgccgaccatcgcgactgat
ttcgaatcactgtcgaaagacttgcaatcgttaaacttaaaaagtttagtcaacaatgtc
gataatttagctcagcagctcagtgacattgccgccagcggaaaaatacagcaagcactg
gataattttgataatgcagccaaagcagttaaaagcaccgcgattaacttagacaacact
caagcagcattaggtaaaaatgggcttgaagtgctgctaaaactcgataatttactggtg
caattaaatcatgatgaacccaagttcgttgagtcgctaaaccatagtttaactgaatta
cgcagtacactattaagcattaatcagcttgcaaaccaagcaggcaacacactcgaccaa
aactcgccattgttgatagaactcaccaatacattggaagaaatccgccgcacagctcga
tcgctacgaagcttgagcgaaaccttagatgaacaacctgaggccatcatacgtggcaaa
aaagccctacctttaggagaataa
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