Shewanella frigidimarina: Sfri_1995
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Entry
Sfri_1995 CDS
T00395
Name
(GenBank) trimethylamine-N-oxide reductase c-type cytochrome TorC
KO
K03532
trimethylamine-N-oxide reductase (cytochrome c), cytochrome c-type subunit TorC
Organism
sfr
Shewanella frigidimarina
Pathway
sfr00680
Methane metabolism
sfr01100
Metabolic pathways
sfr01120
Microbial metabolism in diverse environments
sfr02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
sfr00001
]
09100 Metabolism
09102 Energy metabolism
00680 Methane metabolism
Sfri_1995
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Sfri_1995
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sfr02000
]
Sfri_1995
Transporters [BR:
sfr02000
]
Other transporters
Transmembrane electron carriers [TC:
5
]
Sfri_1995
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cytochrom_NNT
TorC_3rd
Mtrc-MtrF_II-IV_dom
Cytochrom_c3_2
Cytochrome_C7
Cytochrom_CIII
DHC
Paired_CXXCH_1
FdhE_C
Cytochrom_c_NrfB-like
Motif
Other DBs
NCBI-ProteinID:
ABI71841
UniProt:
Q082H4
LinkDB
All DBs
Position
complement(2366825..2368003)
Genome browser
AA seq
392 aa
AA seq
DB search
MKWFINTWRRLNQPAKYLTLGTISLSAFLMGIIFWGGFNTALEMTNTEEFCISCHSMESK
PYQELQQTVHWSNHSGVRATCPDCHVPHNWSRKIGRKIEASHDMWGWLMQTVNTEEKFES
KRLEMASREWKRFDRDNSLACKNCHNYDSMKWDDMSKLAQKQMKRAAEIDQSCVDCHKGI
AHKLPDMGTSRAPELIAQVGSGETGLVVGAQYFTALTKPLYFNQKTDVEAGTLNIATKVT
VLEINGSRVLVGINGWRKKIGAGRVIYFDFGLNILSAQLSKDAALEEGVMNVFEQKEDPM
TGLTWQRVEAKIWTDADYLINDLQPLWDYARTTYTRSCSVCHTQPAEAHFDANSWPGMFK
GMIAFVNMDQDTQALVQKYLQEHSSTFDKSAH
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgaaatggtttattaatacctggcggaggctaaaccagcctgccaaatatcttacatta
ggcacaattagcctatctgcttttttaatggggattatattctggggtggttttaatacc
gcactggaaatgaccaacactgaagagttctgtattagctgtcacagtatggaaagcaag
ccctaccaagagctacagcaaacggttcattggtctaatcactctggcgttcgggccact
tgccccgattgtcacgtgcctcataactggagtcgtaaaattgggcgcaagattgaagca
tcacatgatatgtggggttggttgatgcaaactgttaatactgaagaaaaatttgaatca
aaacgtctagagatggctagccgtgagtggaaacgcttcgaccgtgataactctttggcg
tgtaaaaactgccataactatgactcgatgaaatgggatgacatgtcaaagttggcgcaa
aaacaaatgaagcgtgcagcagagatagaccagagctgtgttgattgccataaaggtatt
gctcacaaacttcctgacatggggacttctcgtgcaccagaactcattgcacaagtagga
tctggcgaaactggtcttgtggttggtgctcagtactttactgccttgactaaacccctt
tattttaatcaaaaaacagatgttgaagctggcacgttaaacattgccactaaagtgacg
gtacttgaaatcaatggcagtcgtgtactagttgggattaatggttggcgtaaaaaaatt
ggtgctggtcgtgttatctatttcgattttggtcttaacattctgtcagctcagttatca
aaagatgctgcgttagaagaaggcgtaatgaatgtttttgaacagaaagaagaccctatg
accggattaacatggcagcgtgttgaagccaaaatttggacagatgctgactacctaatt
aacgatttacagccactttgggattatgcccgcaccacttataccagaagttgtagtgtg
tgccatacccaaccagcagaagcacactttgacgctaacagctggcctggaatgtttaaa
ggcatgattgcattcgtcaacatggaccaagacactcaagcgcttgtacaaaagtactta
caagagcattcatctactttcgataagtcggcgcattaa
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