Shewanella frigidimarina: Sfri_2020
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Entry
Sfri_2020 CDS
T00395
Name
(GenBank) PP-loop domain protein
KO
K14058
tRNA 2-thiocytidine biosynthesis protein TtcA
Organism
sfr
Shewanella frigidimarina
Brite
KEGG Orthology (KO) [BR:
sfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sfr03016
]
Sfri_2020
Transfer RNA biogenesis [BR:
sfr03016
]
Prokaryotic type
tRNA modification factors
Thiolation factors
Sfri_2020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP_bind_3
Motif
Other DBs
NCBI-ProteinID:
ABI71866
UniProt:
Q082E9
LinkDB
All DBs
Position
2392890..2393828
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AA seq
312 aa
AA seq
DB search
MSEVDTIAKQNITRMNKLQKRLRHEVGSAIADYNMIEDGDRVMCCLSGGKDSYTMLDILL
TLQQRAPIKFEIVAVNLDQKQPGFPEHVLPAYLDKLGVAYHILEKDTYSIVKEKIPEGKT
TCSLCSRLRRGTLYGFAQHIGATKIALGHHRDDIIETMFLNMFYAGKQKAMPPKLLSDDG
ANMVIRPLAYCREKDIEEYSTLKSFPIIPCNLCGSQENLKRGAVKDMLQMWDKQHPGRIE
TIFTAMQNTSPSQGVDRENFDFISLKRNPDAVNTGDVADADLPAFDFVDISNNGHINLDI
SNRIDVVATFKP
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaagttgatacaatcgctaaacaaaatattactcgtatgaataaactgcaaaag
cgtctacgacatgaagtcggttcagccattgcagactacaatatgatcgaagacggtgat
cgtgttatgtgctgcctttccggcggcaaagacagctacaccatgctggatattttatta
acccttcaacaacgtgccccaatcaaatttgaaattgtggctgttaacctagaccaaaag
caaccaggttttcctgagcacgttttacctgcttatttagataagttaggcgtggcttat
catattctcgaaaaagatacgtattctatcgttaaagaaaagatccctgaaggcaaaacg
acatgttcactttgctctcgcttacgtcgcggcactctttatggatttgcccaacatatt
ggcgcaacaaaaattgctttaggtcatcatcgtgacgatattattgaaaccatgtttttg
aatatgttctacgctggcaaacaaaaagcaatgccgcctaaactattgtctgatgacggc
gctaatatggtcattcgtccattggcctattgccgtgaaaaagatattgaagaatattca
actctaaaatcatttcctattattccttgcaacttatgcggctcacaagaaaacttaaaa
cgtggcgcagttaaagacatgttacaaatgtgggataagcaacaccctggtcgtattgaa
actatttttactgcaatgcagaatacctcaccttcacaaggtgttgatcgcgagaatttt
gattttatatcattaaagcgtaatcccgatgctgttaacaccggtgatgtagccgatgct
gacttacctgcttttgattttgttgatatcagtaataatggtcatatcaatttagacatt
agtaatagaatcgatgtggtagcaacgtttaagccataa
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