Shewanella frigidimarina: Sfri_2028
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Entry
Sfri_2028 CDS
T00395
Name
(GenBank) Ser-tRNA(Thr) hydrolase / threonyl-tRNA synthetase
KO
K01868
threonyl-tRNA synthetase [EC:
6.1.1.3
]
Organism
sfr
Shewanella frigidimarina
Pathway
sfr00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sfr00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Sfri_2028
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sfr01007
]
Sfri_2028
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sfr03016
]
Sfri_2028
Enzymes [BR:
sfr01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.3 threonine---tRNA ligase
Sfri_2028
Amino acid related enzymes [BR:
sfr01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
Sfri_2028
Transfer RNA biogenesis [BR:
sfr03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
Sfri_2028
Prokaryotic type
Sfri_2028
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
HGTP_anticodon
tRNA_SAD
TGS
MCM_WH_arc
Motif
Other DBs
NCBI-ProteinID:
ABI71874
UniProt:
Q082E1
LinkDB
All DBs
Position
complement(2399741..2401669)
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AA seq
642 aa
AA seq
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MPIITLPDGSKREFANPVSTLDVALDIGPGLAKACIAGRVNGELKDATDLITADSELAII
TAKDEEGVEILRHSCAHLLGHAIKQMWPETKMAIGPVIDNGFYYDIDLDHKLTHEDIEAL
EKRMLALAKTNYDVVKKVVSWQEARDAFDGRGEEYKIAILDENISKDATPALYHHEEYID
MCRGPHVPNMRFCQNFKLMSVAGAYWRGNSDNKMLQRVYGTAWADKKALKTHLVRLEEAA
KRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWSIFLELEKFIRQKLGQYTYQEVKGPLMMD
RVLWERSGHWDKYAEAMFTTNSENREYAIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGC
CHRNEPSGSLHGLMRVRGFTQDDAHVFCTDDQVQEEVSACIQMVYDTYATFGFDNIVVKL
STRPEKRIGDDDMWDRAEDALKQALANNNIKYEILPGEGAFYGPKIEFTLHDCLDRAWQC
GTVQLDYALPTRLGATYVAEDNSRQTPVMIHRAILGSLERFIGILIEEYAGKFPTWLAPM
QVVVMNITDKQADYVEEIVKFFKEQGIRASFDLRNEKIGFKIREHTLRRVPYLLVVGDQE
MENKEVAVRTRDGIDLGKLKLEDFAAMIRQQISLRSLKLLEE
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgcctattattacattgcctgatggcagcaaacgtgagtttgccaatcctgtatcgact
cttgatgttgcattagacatcggccctggtttagcaaaagcgtgtattgctggccgtgta
aacggtgaattaaaagatgcaactgacttaatcactgcagactcagaattagctatcatc
acggccaaagacgaagagggtgttgaaatccttcgccattcttgtgcgcatttattaggt
cacgcgatcaagcaaatgtggccagaaaccaaaatggcaatcggcccggttatcgacaac
ggtttttattacgacatcgacttagaccataagctgacgcatgaagacatcgaagcccta
gaaaagcgtatgcttgcattagccaaaactaactacgatgtggttaaaaaggttgtatct
tggcaagaggcccgcgatgcatttgatggtcgtggtgaagaatacaaaattgctatttta
gatgaaaacatcagtaaagacgcaacaccagcgctttatcaccacgaagaatacatcgat
atgtgtcgtggtcctcatgtgccaaacatgcgtttttgtcagaactttaagttaatgagc
gttgctggtgcatattggcgcggtaactctgataacaaaatgctgcaacgtgtatacgga
acagcatgggccgataaaaaagcccttaaaactcatttagtgcgtttagaagaagcggct
aagcgtgatcaccgtaaaattggtaaacaattagatttgtaccatatgcaagaagaagca
ccaggaatggtgttttggcataacgatggttggagcatatttttagaacttgagaaattc
attcgtcaaaagctaggtcaatacacttatcaagaagtgaaaggcccactaatgatggat
cgtgtgttatgggaacgttctggtcactgggataaatacgcagaagccatgttcactact
aatagcgaaaaccgtgaatacgcgatcaagccaatgaactgtcctggtcatgtacagatt
ttcaaccaagggttaaaatcttatcgtgacttaccattacgtatggcagagtttggttgc
tgtcatcgtaacgaaccatctggttcacttcacggtttaatgcgcgtgcgtggttttact
caagacgacgctcatgttttctgtactgatgatcaagtacaagaagaagtcagtgcatgt
atccaaatggtatatgacacatacgctacatttggtttcgataatatcgtagttaaactg
tcaactcgccctgaaaagcgtattggcgacgacgatatgtgggaccgagctgaagacgct
ttaaagcaagctcttgccaataataatattaaatatgaaatattaccgggtgaaggcgcg
ttttatggtccaaaaatcgaatttactttgcatgactgtttagatcgtgcatggcaatgt
ggtacagtacaactcgattatgcattaccgactcgtttgggtgccacttatgtcgcagaa
gacaacagtcgccagacgccagtaatgatccatcgtgctattttaggttctttagaacgt
ttcataggtatattgatagaagaatacgccggtaaattcccaacttggcttgctccaatg
caagtagttgtaatgaacattaccgacaaacaagctgattatgttgaagaaatcgttaaa
ttcttcaaagaacagggtattcgagcatcttttgacttgaggaatgagaaaataggcttt
aaaatacgcgaacacaccctaagacgtgtgccttatttattggtcgttggtgatcaagaa
atggaaaataaggaagtagcggtgcgtacacgtgacggtatcgatttaggcaagttaaaa
ctagaagatttcgccgcgatgatacgtcaacagatttcgctccgtagtctcaaattgttg
gaggaatag
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