Shewanella frigidimarina: Sfri_2130
Help
Entry
Sfri_2130 CDS
T00395
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
sfr
Shewanella frigidimarina
Brite
KEGG Orthology (KO) [BR:
sfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sfr03032
]
Sfri_2130
03400 DNA repair and recombination proteins [BR:
sfr03400
]
Sfri_2130
Enzymes [BR:
sfr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
Sfri_2130
DNA replication proteins [BR:
sfr03032
]
Prokaryotic type
DNA Topoisomerases
Sfri_2130
DNA repair and recombination proteins [BR:
sfr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Sfri_2130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
ABI71976
UniProt:
Q081T9
LinkDB
All DBs
Position
complement(2534002..2536731)
Genome browser
AA seq
909 aa
AA seq
DB search
MTDLASSISPINIEDELKNSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMSELKNDWN
KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRYTLIDGQGNFGSVDGDSAAAM
RYTEIRMQKLAHSLLADLEKETVDFVPNYDGTEMIPAVLPTRVPNLLINGSSGIAVGMAT
NIPPHNLTEVVKGCLALIEDPSLSIEQLMEYIPGPDFPTAASINGRKGIIDAYNTGRGRA
IMRSKAEIETEENGRERIIVHEIPYQVNKARLIEKIAELVKDKKLEGISGLRDESDKDGM
RIVIEIKRGEVGEVVLNNLYSQTQMQCSFGINMVALTNGQPKLFNLKEMLECFILHRREV
VTRRTVFELRKARERAHVLEALAIALANIDPIIALIKASPTPAEAKAKLVAQGWELGHVQ
GMLEKAGDDAARPEWLEPEFGIRDGQYYLTEQQAQAILELRLHRLTGLEHDKILAEYEEL
LVLIAGLLFILRTPSRLMEVIKEELEEILEQYGDERRTIINANEIDMSLEDLINEEDVVV
TLSHLGYAKYQVLSDYQAQRRGGKGKAATKVKDEDFVEKLLVANTHDTILCFSDFGKMYW
LKVYQLPLASRTARGRPIVNLLPLSDGEHITAILPVREYADDKYIIMATAHGTVKKTALT
AYSNPRANGIIAVNLKDGDQLIGVDITEGSDDIMLFSNEGKVVRFNEKARDSETGEVKID
AETGEEIIALRPMGRTATGVRGIKLDAGQKVVSLIVPKGDGAILTVTENGYGKRTELSEY
PAKSRGTKGVVSIKVSERNGEVVGAVQVGTFDEIMLISNKGTLVRTPAEGVSIIGRNTQG
VTIIRTAEDEKVVGLQRIEEIQTEELLDEEGNVIPVSDVIDAEVTDAESTDDVEATDPDE
AKTGDDEQE
NT seq
2730 nt
NT seq
+upstream
nt +downstream
nt
atgactgatctggcatcatctatttcgccaattaacatcgaagacgaacttaagaattct
taccttgattacgcaatgagtgtaattgtaggtcgtgctttacctgacgtccgtgacggt
ttaaaaccagttcaccgtcgagtattgttcgcaatgagcgaattaaaaaacgattggaac
aaaccatataagaaatccgctcgtgtcgttggtgacgtaattggtaaatatcacccacac
ggtgatacagctgtatacgatacaattgtacgtatggcgcaaccgttctcgctacgctac
acattgattgacggacaaggaaactttggttcggtcgacggtgactcggcagcggcgatg
cgttataccgaaatccgcatgcaaaagttggcgcattcattattagccgaccttgaaaaa
gaaactgtggattttgtgcctaactacgatggcaccgaaatgatccctgcggtgttacca
acacgtgtaccgaacctattaatcaatggttcatcaggtattgcggttggtatggccact
aacattccacctcacaacttaacagaagtagtgaaaggctgtttggcgttaatcgaagat
ccaagtttatcgattgaacagttaatggaatacattccaggtccagattttccaacggca
gcttcaataaacggtcgcaaaggcattatcgatgcttataacactggccgtggacgcgct
atcatgcgctctaaagcggaaattgaaactgaagagaatggtcgtgaacgtattattgtt
catgaaattccatatcaagttaacaaagcccgtttgattgaaaaaattgccgagcttgtt
aaagataaaaaattagaaggtatcagtggcctacgcgatgagtctgataaagacggtatg
cgtattgttattgaaatcaaacgtggtgaagtgggtgaggttgtactaaacaacttatat
tctcaaacacaaatgcagtgttcttttggtatcaacatggtggcattgactaacggtcag
cctaaattgtttaaccttaaagaaatgctggagtgttttattcttcaccgtcgtgaagtg
gtcacgcgccgtactgtatttgaactgcgtaaagcccgtgaacgtgctcatgttcttgaa
gcacttgccattgcattggctaacatcgaccctattattgcgcttattaaagcctctcct
acacctgctgaagccaaagcaaaattggttgcacaaggttgggaattaggtcatgtacaa
ggcatgcttgaaaaagctggtgatgacgctgcacgccctgaatggttagagcctgagttc
ggtatccgtgacggtcagtactatttaactgagcaacaagcacaagcgattttggaatta
cgtctgcaccgtttaaccggtctagaacatgacaagattttagctgaatatgaagagctt
ttagttctgattgcaggtttgttattcattcttcgtactccatctcgtttgatggaagtg
attaaagaagaacttgaagaaatacttgagcaatacggtgatgaacgtcgcactattatt
aacgctaatgaaattgatatgagtcttgaagacttaatcaatgaagaagacgttgtagtg
accttgtctcacttaggttatgcgaaataccaagtactgtctgattaccaagcgcagcgt
cgtggtggtaaaggtaaagccgcaactaaagtaaaagatgaagactttgtagaaaagtta
ttggtggcaaacactcatgacaccatcttgtgtttctctgactttggtaagatgtactgg
ctaaaagtgtatcaattaccattggcaagtcgtactgcccgtggtcgtccaattgttaac
ttattaccactatctgacggtgagcacattactgccattctaccggtacgtgagtatgca
gatgataaatatatcatcatggcaacagcacacggtaccgtgaagaaaacagcattaaca
gcatatagtaaccctcgtgcaaacggcattattgctgtgaacctaaaagacggcgaccaa
ttaattggcgttgatattactgaaggtagtgacgacattatgttgttctctaacgaaggt
aaagtggttcgctttaatgagaaagcgcgtgattctgaaaccggtgaagtgaagatagat
gctgaaactggcgaagaaatcattgcactgcgccctatgggtcgtactgctaccggtgtt
cgtggtattaagcttgatgcgggccaaaaagtggtgtcgttaattgtgcctaaaggtgac
ggtgcaattttaaccgtaactgaaaatggttacggtaaacgtacagagctaagtgaatac
ccagcgaagagccgcggtactaaaggtgttgtgtcgattaaagtcagtgaacgtaacggt
gaagtagtcggtgctgttcaagtgggtacttttgacgaaatcatgttgatcagtaataaa
ggcaccttagtgcgtactcctgctgaaggcgtatccattattggtcgtaacactcaaggt
gtgaccatcatccgtaccgcagaagacgagaaagtcgttggtttgcaacgtattgaagaa
attcaaactgaagagctgttagacgaagaaggcaatgttattccagtaagcgatgttatc
gatgctgaagtgacagatgctgagtcaactgacgatgttgaagcaacagatccagatgaa
gccaaaaccggagatgacgaacaagagtag
DBGET
integrated database retrieval system
