Shewanella frigidimarina: Sfri_2139
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Entry
Sfri_2139 CDS
T00395
Name
(GenBank) protein of unknown function RIO1
KO
K07178
RIO kinase 1 [EC:
2.7.11.1
]
Organism
sfr
Shewanella frigidimarina
Pathway
sfr03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
sfr00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
Sfri_2139
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
sfr01001
]
Sfri_2139
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sfr03009
]
Sfri_2139
Enzymes [BR:
sfr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
Sfri_2139
Protein kinases [BR:
sfr01001
]
Serine/threonine kinases: Other
RIO family [OT]
Sfri_2139
Ribosome biogenesis [BR:
sfr03009
]
Eukaryotic type
Pre-40S particles
Kinases
Sfri_2139
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIO1
APH
Kdo
YrbL-PhoP_reg
TCAD9
Pkinase
ABC1
Motif
Other DBs
NCBI-ProteinID:
ABI71985
UniProt:
Q081T0
LinkDB
All DBs
Position
2546472..2547335
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AA seq
287 aa
AA seq
DB search
MKTPIRLQPLVDDGLVDEVISQLMSGKEATVYMIRCGDAIRCAKVYKEATKRSFKKAAQY
QEGRKTKNSRRGRAMEKGSKYGREEQEKAWQNAEVDALYKCAAAKIRVPVPYGCFDGVLL
MELITNVHGDVAPRLNDVTQMSVEQAQTQHYVMMGYVVRMLCAGIVHGDLSEFNVLVDQN
GPVIIDLPQAVDASANNNAKAMLFRDVNNMTDYYSQFAPELAATKYAKEMWALYEQGELT
PETQLTGLFEEDTTAADVDSVLEEINAAFEEAQERRERMSDANNDEY
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacgcctatacgattacaaccactggttgacgatggtctcgtcgatgaagtgata
agccaactcatgagtggcaaagaagctacggtctatatgatcagatgtggcgatgcgatt
cgctgcgccaaagtgtataaggaagccactaagcgcagttttaaaaaagcagcacaatat
caagaaggtcgaaaaactaaaaacagtcgtcgtggtagagccatggaaaagggttctaaa
tacggtcgtgaagaacaagaaaaagcttggcagaatgccgaggtcgacgcgttatataaa
tgcgccgcagctaaaattagagtacctgtaccttatggctgctttgatggggtgttattg
atggagttgatcaccaatgttcatggtgatgtagcacctcgattaaatgacgtcacccag
atgagcgtagaacaagcacaaacacagcattacgtcatgatgggttatgtagtacggatg
ttatgtgcaggtattgttcatggcgatttatcagaatttaacgtgctcgtagatcagaat
ggaccggtgatcattgacctgccccaagctgttgatgcatcagcaaacaataatgccaaa
gcgatgttatttcgtgatgtgaataatatgacagactattattctcaatttgccccagaa
ttagcagcaacaaaatatgctaaagaaatgtgggccttgtatgaacaaggtgaattaacg
ccggaaacacaattgaccggtttgtttgaagaagacacgaccgcagctgatgtcgattcg
gtattagaagaaatcaacgctgcatttgaagaagcgcaagaaagacgcgagcgcatgagt
gatgcaaacaacgacgagtattaa
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