Shewanella frigidimarina: Sfri_2164
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Entry
Sfri_2164 CDS
T00395
Name
(GenBank) glycogen debranching enzyme GlgX
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
sfr
Shewanella frigidimarina
Pathway
sfr00500
Starch and sucrose metabolism
sfr01100
Metabolic pathways
sfr01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
sfr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
Sfri_2164
Enzymes [BR:
sfr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
Sfri_2164
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SSDB
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Gene cluster
GFIT
Motif
Pfam:
CBM_48
Alpha-amylase
Motif
Other DBs
NCBI-ProteinID:
ABI72010
UniProt:
Q081Q5
LinkDB
All DBs
Position
complement(2582129..2584255)
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AA seq
708 aa
AA seq
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MVSTLQGHVMDMTSGYPYPLGATLDDNGVNFSLFSAHATKVVLCIFDSTGCVEIAQYIMQ
HQTRQIWHCHLSGAKAGLLYGYRVFGPYQPELGHRFNHHKFLLDPYAKRLVGEVTYHSAI
YGYDIDALNEDLSFDTQDSAPYMPKCMVSDSRFVNDIPIAPLNISLARSIIFETHVKGFT
QQHPNIQLSQQGTFAGLASQPIIDYLQNLGITCIELLPVHGFFDEPFLVQKGLTNYWGYN
SIAFMAPHSAYLSDEGDIGEFRRMVSTLHLAGIEVILDVVFNHTAEGNHLGPTFSFRGID
NASYYRLLPNEKRFNINDTGCGNTFNLNHPQVLMLVMDSLRYWVEVMGVDGFRFDLASCL
GREAYGFDRGSGFFDAITQDPVLCKVKLIAEPWDIGPGGYQLGNYPVAFSEWNDRYRDAM
RKFWRGDSGLSPEFAKRFHGSSDFFEHNGRGPAASINFITSHDGFSLHDLVSYRDRHNLA
NGEENRDGHQENCSSNYGIEGECDDVDINAIRSRQKRNLLTCLLLSQGVPMLLAGDESSQ
TQQGNNNAYCQDNPIGWFNWQQIDWSLVNFTAQLITLRKRFPMLCHQAFIHKPEALFDNG
LAWFNRQGEVMNKCHWGEYQIRTLSVILTGNLAHADVGAVAESTEALLLMINTDELAHTF
TLPQLPHLRYWHCLLHTQESEPSVDEDQQVSLMSRSLMLFHTEFTRSN
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atggtttcaactttacaagggcatgttatggatatgaccagcggttatccttatccacta
ggggcaacactcgatgataacggggtgaatttttcgttattttcggcgcatgcaacaaaa
gtagtgctgtgtatttttgactccacaggctgtgttgaaatagcgcaatacattatgcag
catcaaacacgacaaatttggcattgccacttatcgggtgctaaagcgggactgctttat
ggctatcgagtttttgggccttaccagcctgaactcgggcaccgttttaatcatcataaa
tttctgctcgatccttacgccaaaagattagtcggggaagtgacataccactctgcgatt
tatggttatgacattgatgccttaaatgaagatttgtcatttgatactcaagacagcgca
ccatacatgcccaaatgtatggtgtcagacagtcgatttgtaaacgatattccaattgca
ccccttaatattagtctcgctagaagcatcatattcgagactcatgtaaagggttttact
caacagcaccccaatattcaattgtcccaacaagggacgtttgctgggttagctagccaa
ccgataattgactatttacaaaacttagggattacctgcatagagttgttacccgtgcat
ggcttttttgatgaaccctttttggtgcaaaaaggcctgactaattactggggttacaac
agtattgcttttatggctccacattctgcttatttatcggatgagggagatattggcgaa
ttcagacgaatggtttctacacttcatcttgctgggattgaagtgatcctcgatgtggtt
tttaaccataccgccgaaggaaaccatttgggacccactttcagttttcgtggtatcgat
aatgctagctactatcggttattacccaatgaaaaacgtttcaacattaacgatactggc
tgcggtaataccttcaaccttaatcatccccaagtactgatgctggtcatggattcgctg
cgctactgggtagaagtgatgggagtggatgggtttagatttgatttagccagttgcctt
ggacgagaagcttatggttttgatcgtggaagtggcttttttgatgccatcactcaagat
cctgtgttgtgcaaagtcaaattgattgctgagccgtgggacatcggcccgggggggtat
cagttaggcaattacccagtggcattcagtgagtggaatgaccgttatagagatgctatg
cgcaaattctggcgtggcgacagtggtttatcacctgagtttgccaagcggttccacggt
tcaagcgattttttcgaacataacggtcgtggccctgccgccagcatcaattttattact
agccatgatggttttagtttgcatgatttggtcagttaccgtgatcgtcataacttggcc
aacggtgaagaaaatcgcgatggtcatcaagaaaactgtagcagcaattacggcatagaa
ggtgagtgcgacgatgtcgatattaatgcaatccgcagccgacaaaaacgtaacttatta
acgtgtttgttgctgtctcagggggtgccaatgttgttggccggcgatgaatctagccaa
actcagcaaggtaataacaatgcctattgccaagacaatcctattggttggttcaactgg
cagcaaatagattggtcattggtgaattttaccgctcagttgatcaccttacgtaaacgc
tttcctatgttatgccatcaagcatttattcataaacctgaagcactattcgataatggt
ctagcatggtttaaccgccagggtgaggtgatgaacaaatgccattggggtgagtatcaa
atccggactttgagtgtcatcttaacgggaaatttagctcatgctgatgttggcgctgtc
gctgagagtacagaagcattgttattgatgattaatacagacgagttagcgcataccttt
actctgccccaattaccccatcttcgatattggcattgtttattacatacccaagaaagt
gagccttcagtggatgaggatcagcaagtcagtttaatgagtcgtagtttaatgttattc
cataccgagtttacaaggagcaattga
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