Shewanella frigidimarina: Sfri_2246
Help
Entry
Sfri_2246 CDS
T00395
Name
(GenBank) methionyl-tRNA synthetase
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
sfr
Shewanella frigidimarina
Pathway
sfr00450
Selenocompound metabolism
sfr00970
Aminoacyl-tRNA biosynthesis
sfr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sfr00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
Sfri_2246
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Sfri_2246
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sfr01007
]
Sfri_2246
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sfr03016
]
Sfri_2246
Enzymes [BR:
sfr01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
Sfri_2246
Amino acid related enzymes [BR:
sfr01007
]
Aminoacyl-tRNA synthetase
Class I (U)
Sfri_2246
Transfer RNA biogenesis [BR:
sfr03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
Sfri_2246
Prokaryotic type
Other AARSs
Sfri_2246
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1g
tRNA_bind
tRNA-synt_1
tRNA-synt_1e
Anticodon_3
tRNA-synt_1f
Anticodon_1
Motif
Other DBs
NCBI-ProteinID:
ABI72092
UniProt:
Q081H3
LinkDB
All DBs
Position
2690305..2692356
Genome browser
AA seq
683 aa
AA seq
DB search
MTKSQRKILVTSALPYANGPIHLGHMLEYIQTDIWSRFQKLRGHECHYICADDAHGTPIM
LKAQQMGITPEEMIAQVQKEHQQDFADFNIQFDNFHSTHSEENRILASDIYLKLRDGGYI
KTKTISQLYDPEKLMFLPDRFVKGTCPKCKSEDQYGDNCDNCGATYSTTDLINPKSAVSG
ATPIMKDTEHFFFDLPAFEGMLKEWIQSGSLQQEMANKLNEWFEQGLKQWDISRDAPYFG
FEIPDAPGKFFYVWLDAPIGYMGSFKNLCDKRDDLNFDDFWSLDSTAEVYHFIGKDIVYF
HSLFWPAMLEGAGIRKPTSVYAHGYVTVNGSKMSKSKGTFIKARTYLDNLDPEYLRYYYA
AKLNSRIDDLDLNLEDFAQRVNSDLVGKLVNLASRTAGFISKRFDGKLAKVTDSSLTDIF
LAKSEVIAELYETREFGKAMREIMALADIANAYVADAAPWQLVKQDDKQDEAHQVCSNAL
NLFRILVTYLKPVLPKLAENVEGFLQLTLTWDNLGQDLAGHEIATFKALMQRIEPKSIEA
IIDASKENLQATNTDAPKTEAPTQAVNQLELDPISPEISFEDFAKIDLRIARISKAEHIE
KANKLLRLELDLGGDTKQVFAGIKSAYAPEDLVGKLTVMVANLAPRTMKFGDSEGMVLAA
GPGGKDLFILEPHEGALPGMRVK
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaatcacagcgtaaaatactggtcacaagtgcccttccttatgccaatggccca
atccatctaggccacatgcttgaatatatccaaacggatatttggtcacgttttcaaaag
ttacgtggacatgaatgccactacatttgtgccgacgatgctcacggcacgccgattatg
cttaaagcacagcaaatgggcattacgccagaagaaatgattgcccaagtgcaaaaagag
caccagcaagatttcgctgacttcaatatccagtttgataactttcacagcactcacagc
gaagaaaaccgcattttagccagtgatatttatctaaaacttcgtgatggtggttacatc
aaaaccaaaaccatttcacaattatatgatcctgaaaagttaatgttcttaccggaccgt
tttgttaaaggcacctgcccaaaatgtaagtctgaagatcaatacggcgataactgtgac
aactgtggtgcaacttatagtacgaccgatttgataaaccctaaatcggcagtctctggt
gcgacaccaataatgaaagataccgaacacttcttttttgacttgccagcatttgaaggc
atgttaaaagagtggatccaatcaggctctttacaacaagaaatggccaacaagcttaac
gaatggtttgagcaagggctaaaacaatgggacatctcacgtgatgcaccctactttggt
tttgaaatccctgatgctcccggtaaatttttctatgtttggttagatgcgcctattggt
tatatgggttcatttaaaaacctatgtgacaagcgtgatgatttaaactttgacgatttt
tggagcctagactcaaccgcagaggtttatcacttcatcggtaaagacattgtttatttc
cacagtttattctggccagcaatgcttgaaggcgcaggtattcgtaaaccgactagtgtt
tatgctcacggctatgtcaccgtaaacggttcaaaaatgtctaagtctaaaggcacgttt
attaaagcgcgtacctatttagataatttagatccggaatacctacgttattattacgca
gctaaattaaacagtcgtattgatgatttagatttaaatttagaagattttgctcaacga
gttaactcagacttggtcggtaaactggtaaaccttgcatcgcgaactgctggctttatc
agcaaacgctttgacggcaaattagccaaggtaacagacagcagcttaaccgacatattc
ttagctaaaagcgaagtgattgccgaattatatgaaactcgcgaatttggcaaagcgatg
cgtgaaattatggcattagctgatattgccaacgcctatgttgccgacgcagcaccttgg
caactggttaagcaagacgataaacaagatgaagcacatcaggtttgcagtaatgcatta
aacttgttcagaatcttggtcacttaccttaagcctgtattacctaaactggccgaaaat
gttgaaggttttttacagttaaccttaacgtgggacaatttaggtcaagatcttgctggt
catgaaatcgcgacattcaaagcattaatgcagcgtatcgaacctaagagcattgaagct
atcatcgatgcctctaaagagaacttgcaagcgactaatacggatgcacctaaaaccgaa
gcgccgacacaagctgttaatcaattagaactcgatccaattagccctgaaataagcttt
gaagattttgctaaaattgatttacgtattgctcgaatcagcaaagcggaacatattgaa
aaagccaataaattactgcgtcttgaattagacttaggcggcgataccaaacaagtattt
gcgggtattaaatcagcttatgcgcctgaagatttggttggtaaactcaccgtaatggtg
gctaaccttgccccacgcacgatgaagtttggtgattcagaaggtatggtattagctgcc
ggtcctggcggtaaagatttgtttatactagaacctcatgaaggcgcactgcctggcatg
cgagttaagtaa
DBGET
integrated database retrieval system
