Shewanella frigidimarina: Sfri_2549
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Entry
Sfri_2549 CDS
T00395
Name
(GenBank) TonB-dependent siderophore receptor
KO
K16088
outer-membrane receptor for ferric coprogen and ferric-rhodotorulic acid
Organism
sfr
Shewanella frigidimarina
Brite
KEGG Orthology (KO) [BR:
sfr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sfr02000
]
Sfri_2549
Transporters [BR:
sfr02000
]
Other transporters
Pores ion channels [TC:
1
]
Sfri_2549
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl
Motif
Other DBs
NCBI-ProteinID:
ABI72391
UniProt:
Q080C4
LinkDB
All DBs
Position
3052685..3054787
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AA seq
700 aa
AA seq
DB search
MKPQHIFALSSLVLAMGFLVQPFALAAEQQNADNNDQNIEKIQILGVRYKRVSQGATGLT
MEIDETPQSISVVTNEQITNFGANNLNDVLRLATGINVEEWETNRTQYTSRGFEIKSTQI
DGVGLPNDWGIVTGAMEAYGYEKIEVIRGANGLLTGIGNSAGTINYVRKRPTNENEGEVG
VSYGSDDFKRVQADYSALLTESGSWAGRVVAVVEDKGSYLDGLENDRGYIYAVVDGQLTD
NSTLTLGFSYQDANTDGNTWGGLVFNYTDGTQAEWDTSATTTQEWTMWDTSNTTAFVEYT
YILPNDWDLKVAYNHQGLEDESKLFYASGTIDKDTGLGLNGWPGRYDTEFSADIVDITTI
GHYSLFGQDHELTLGLSGSQSKKYMYQHPFDFAATPAYGPTPAFPYDLNAIPEPEWGDKV
EYSDIDVSLLRAYGSTKFNINDSLFVVAGFNAIKYTREGINSGVDIDNDESEFSPYAGVV
YSITEDINTYFSYSDIYQPQEQYDYDGYFLDPTKGVNYELGLKTLWLDNDLMATFALFSA
EQNNLASYAGLNANGNYYYKGVNVESKGFEVEVTGYITDNLNAVLAYTLLDVEDDNGAEA
NEWAARNVVNFSMDYTIPQLPEVSVGFGGRWQSETKNVDSNVEQDAYLVVNAFASWDVSE
DLNLRANINNLTDEKYINSLATIGYYGAPVNGSVNLTYRF
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atgaaacctcaacacatctttgcactttcatcattagttttggctatgggctttctagta
cagcccttcgcccttgcagccgaacaacaaaatgctgacaacaatgatcaaaatatcgaa
aaaatccaaatcttgggtgttcgttataaacgcgttagccaaggcgcgaccgggttaacc
atggagattgatgaaactcctcagtcaatcagtgtggtgaccaacgaacagataactaat
tttggggccaataaccttaatgacgtacttcgtcttgcgacgggtattaatgttgaagaa
tgggaaactaaccgcacacaatatacttctcgcggttttgaaattaaaagtacccaaatt
gatggcgtcggtttacctaatgactggggtatcgtcactggtgcaatggaagcttatggt
tatgaaaaaattgaagttattcgtggtgctaacgggctacttaccggaataggtaattct
gctggtaccattaattatgtccgtaaacgcccaacgaatgaaaatgaaggcgaagtaggc
gtttcctacggttcggatgactttaagcgcgtacaagctgactactctgccctgttaaca
gaaagcggtagttgggctggtagagttgttgcggtggtagaagacaaagggtcataccta
gatggcctagaaaacgatcgtggctatatttacgctgttgttgatggccaattaacagac
aattcaacgttaacgttagggttttcataccaagatgccaacacagacggcaatacctgg
gggggattagtatttaactatactgacggcacccaagctgagtgggataccagtgcgacc
acaacacaagagtggaccatgtgggacactagcaacacaaccgcatttgttgagtatact
tacattctgcctaacgattgggatcttaaggttgcctataaccatcaaggtttagaagat
gaaagtaagttattttatgcttctggaaccattgataaggacacaggcttaggattaaat
ggttggcctggtcgctatgacactgaattttcagccgatattgtagacatcaccacaatt
ggtcattacagcttatttggtcaagatcatgagctcaccttgggattaagcggttctcaa
agtaaaaaatacatgtaccaacacccatttgattttgcagccactcctgcatatggccca
acgccagccttcccttacgatctcaatgcgatccctgaaccggaatggggcgataaagta
gagtactctgatatagatgtaagcttacttcgcgcttatggttcaactaagttcaatatc
aatgacagcctattcgtggttgctggttttaatgcgattaaatatacccgcgaaggtatt
aatagcggcgttgatatagacaatgacgagagcgagtttagcccttatgcaggtgtggtt
tatagcatcacagaggatataaacacctatttcagttattcagatatttaccaaccgcaa
gagcagtatgattacgatgggtattttttagacccaactaaaggcgtaaattacgagctt
gggcttaaaaccctatggcttgataatgatttaatggctacctttgcactatttagcgct
gagcaaaataacctcgctagctacgccggccttaatgccaacggaaattattattataaa
ggtgtcaatgtcgaatcgaaagggtttgaagttgaagtcactggatatataacagacaac
ctcaatgcagtattagcttatacgctgcttgatgtagaagatgacaacggcgctgaagca
aatgagtgggcagcccgcaacgttgttaacttttcaatggattataccattccacaattg
ccagaagtaagcgttggattcggcggcagatggcaatcagaaaccaaaaacgttgattct
aatgtagagcaagatgcctatttagtggttaacgcttttgccagttgggatgtgtctgag
gacctcaatttaagagctaacattaataacctcaccgatgaaaaatacattaatagcttg
gcgaccataggttattacggcgcgcctgtgaatggttcggtgaacttaacttatcgcttc
tag
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