Shewanella frigidimarina: Sfri_2580
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Entry
Sfri_2580 CDS
T00395
Name
(GenBank) extracellular solute-binding protein, family 5
KO
K19226
cationic peptide transport system substrate-binding protein
Organism
sfr
Shewanella frigidimarina
Pathway
sfr01503
Cationic antimicrobial peptide (CAMP) resistance
sfr02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
sfr00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Sfri_2580
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
Sfri_2580
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sfr02000
]
Sfri_2580
Transporters [BR:
sfr02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Cationic peptide transporter
Sfri_2580
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
ABI72421
UniProt:
Q07ZZ4
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All DBs
Position
3084530..3086155
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AA seq
541 aa
AA seq
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MPVIVKRWYQQMSLCLSSIVLAACGQVQLPSGLVYCSEGNPESFNPQLVTSGTTIDATSH
QIYSRLVNYSQEKAEITPGLATSWQVSDDGLSYVFTLREHVSFHKTRHFTPARDFNADDV
LFSFNRIIDPLHPYHLVSRTGYPFFQSIGFADLIGYIEKVNDYQVIFHLTRKDASFLSNL
ATDFAVVLSAEYGYQLLAQGTPEDIDYYAVGTGPFQLSQYVKNEYIRFKKNPVYWGPTVE
IDQLVFDITPRSTARIAKLITGDCSVSALPKAGELAVLDQHKDIIIDAKPGLNVAFWAFN
TQKPPLDDVRVRRALAHAIDKNNILDVVYNDTAVEATGVLPPASWAYSKNLSPNEYNPEK
AKVLLHQAGVSNLSINVWAMPVARIYNPSALKTAELIQADLARIGVKLNIISYDWSVFTQ
KLASSNYDSVLIGWNADNSDPDNFFTPLLSCAALASNNNRSRWCNKDFEHLLTQAQSVST
QPERKAFYQSAEAIISDQVPLVTIAHAKKVVLKKSNITAMQIRPYGGISFAKTTQAIEGT
E
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgcctgttatagtaaaacgctggtatcagcagatgtctttatgtctctccagtatcgtg
ctggctgcatgcggacaagtgcaattgccttctggcctggtgtattgcagcgaaggtaac
cctgaaagctttaaccctcaacttgttacttcaggtaccactattgatgccacttcacat
caaatttacagtagactcgttaattacagccaagaaaaagccgagatcacacctggattg
gccacatcatggcaggtgtccgatgatggtttaagctatgtttttactttacgtgaacat
gtgagttttcataaaactcgccattttactcccgcaagagactttaatgccgatgatgtg
ttgttttcatttaatcggattattgatccattacacccatatcatctagtcagcagaacc
ggttatcctttttttcaaagtattggttttgctgatttaattggctacattgaaaaagta
aacgactaccaggttatctttcatttaactcgaaaagacgcttcttttttatctaatttg
gctactgattttgccgttgtattatcggcagaatatggttatcaactgttagcccaaggc
actcctgaagatatcgattactacgcagtaggcacaggaccttttcagctcagccagtat
gtgaaaaacgaatatattcgctttaaaaagaatcctgtctattggggccctacggttgaa
attgatcaattagtatttgatatcaccccaagaagcacagcacgaattgctaaattaatt
accggagactgcagcgtgtctgcattacccaaagctggtgagttggcagtgcttgaccaa
cataaagatattattatcgatgctaaacctggactaaacgtagcattttgggcatttaac
actcaaaaaccgccattagatgatgttcgtgtaagacgagcacttgcgcatgctattgat
aaaaataatattctagacgtggtatataacgataccgctgtggaggcgacaggtgtttta
cctccggcatcttgggcttacagcaaaaacttatctccaaatgaatataacccagaaaaa
gccaaagtattactgcaccaagcaggtgtatctaacttatccattaatgtgtgggccatg
cctgttgcacgaatttataatccgagtgcattgaaaacagcggagctcattcaggccgat
ttagcccgtattggcgtaaaactgaatatcattagctatgattggagtgtattcacccaa
aagctagccagttcgaattatgattcagtgttgattggttggaatgcggataatagcgat
ccagataacttttttactccattgttaagctgcgccgcattagcctctaacaataatcgc
tctcgctggtgcaacaaagactttgaacacctgctaacccaagctcagagtgtatcgact
caacctgaacgcaaagcattttatcaatcagcagaagctattattagcgatcaagttccg
ctagtaacaatcgcacatgccaaaaaagtggtgttgaagaaaagcaatattaccgccatg
caaattaggccttatggcggtatttccttcgccaaaacaactcaagcaatagagggaact
gaataa
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