Shewanella frigidimarina: Sfri_2640
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Entry
Sfri_2640 CDS
T00395
Name
(GenBank) transcriptional regulator, CdaR family
KO
K02647
carbohydrate diacid regulator
Organism
sfr
Shewanella frigidimarina
Brite
KEGG Orthology (KO) [BR:
sfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfr03000
]
Sfri_2640
Transcription factors [BR:
sfr03000
]
Prokaryotic type
Helix-turn-helix
Other families
Sfri_2640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Diacid_rec
HTH_30
GGDEF_2
HTH_8
GAF
GAF_2
Motif
Other DBs
NCBI-ProteinID:
ABI72481
UniProt:
Q07ZT4
LinkDB
All DBs
Position
3163305..3164546
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AA seq
413 aa
AA seq
DB search
MHLSINLLPILSQHQVSFNTDIYCLEKFMFQIDTLIAAKIVDRTMKIIGHNINVMNAQAV
ILGSGDIDRIGTVHEGALLAISQNRNVEISQAIASNLHGVKPGLNLPLHYHGQVVGVIGI
TGEPDTLSHYGELLKMTAEMIVEQANLQEQLQWQNRQTEEFISQLIHANEQDLPSLQQWA
LQLGIDLSVPRVAAIIELDSNNPLYQQDNQALKQVLYLLQNPVRDNLIAMTSLTQLVILK
PAFLDGKQFDPELENQRINKLLKRLPANMQLSLHISLGHYFGGELGISYSYRTAKETLDI
GKKLHPTKTKYLYQDYSLQVLLSGLRHHWRGNALAGPYLKLIEVDNNQQLQKTLAAYLDH
MGDIQACANSLFIHRNTLRYRLDKIQTITNIDLRSFNGLLSLYLGQLIHQPST
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgcatttaagcattaacctcctcccaatacttagccaacatcaggtatcattcaatacc
gatatttattgcctagagaaattcatgtttcaaattgatacgctaattgctgctaaaatt
gtcgaccgaaccatgaaaattattgggcataatatcaatgtcatgaatgctcaggcggtg
atattaggttcaggcgatatcgatcgaattggcactgtacatgaaggcgcactattagct
atcagccaaaatcgcaatgttgaaataagccaagccatcgcttcaaacttacatggcgtc
aaacctgggctaaatttaccattacattaccatggccaagtggttggcgttatcggtatc
actggcgagccagacacattaagccactatggtgaactgcttaagatgacagcagagatg
attgtcgagcaagcaaacttgcaagagcaattacagtggcaaaatcgtcaaacagaggag
tttatttcgcaactcattcatgccaatgaacaagacttaccttctttacaacaatgggca
ttgcaattgggtatcgatttaagcgtgccgagagtggctgccatcattgaactcgatagt
aataacccactatatcaacaagacaatcaagcattaaaacaagtactgtatttattacaa
aatcctgtacgcgataacttaattgcgatgacatcactcactcaattagtgattttaaaa
ccggcttttttagatggtaagcaatttgacccagagcttgaaaatcaacgcatcaacaaa
ttgctcaaacgcttacccgccaatatgcagcttagcctgcatatttcattagggcattat
ttcggtggtgaactcggtattagttactcttatcgtaccgctaaagaaacgttagatatt
ggcaaaaaattacatccaacaaaaaccaaatatttataccaagactacagcttacaagtg
ctgttatcaggactgcggcaccactggcgaggtaatgcgcttgccgggccgtacctaaaa
ctcattgaagtcgacaataaccagcaattacaaaaaacacttgccgcttatctagatcac
atgggagatatccaagcctgcgctaacagtttgtttatccatcgaaacacactgcgttat
cgactagataaaattcaaacgattaccaacattgacctacgcagttttaatggattactg
agtttatatttaggccagttaattcaccaacccagcacctag
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integrated database retrieval system
