Shewanella frigidimarina: Sfri_2682
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Entry
Sfri_2682 CDS
T00395
Name
(GenBank) TPR repeat-containing protein
KO
K07114
Ca-activated chloride channel homolog
Organism
sfr
Shewanella frigidimarina
Brite
KEGG Orthology (KO) [BR:
sfr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sfr02000
]
Sfri_2682
Transporters [BR:
sfr02000
]
Other transporters
Pores ion channels [TC:
1
]
Sfri_2682
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA_2
TPR_2
TPR_1
TPR_11
TPR_16
TPR_7
ANAPC3
TPR_12
TPR_8
TPR_6
Ssl1
TPR_19
SOG2
TPR_14
Motif
Other DBs
NCBI-ProteinID:
ABI72522
UniProt:
Q07ZP2
LinkDB
All DBs
Position
3222330..3224435
Genome browser
AA seq
701 aa
AA seq
DB search
MIHFIRPEWLLGFIPVLILSALFWRKHSQQSAWKQYIAPHLSQLLISQTVEKSHQPKWLL
IVCWIIAVIALSGPALNKQNLPVFATEQGRVLIMDMSQSMYATDLSPNRLSYAKFRATDL
LNELKEGETGLIAYAGDAYTISPLTRDSDTILNLLPTLSPDIMPTKGSNLAAALSLAEKL
LAQGGHVSGDIIVMTDGISAQQFNQASSALNSRYRLSIMAFGSKQGAPIRLADGQLLRDS
SNEVVVAKTDYGLLQKLTQQHQGILVPAQTDGSDVSTLTNWLATDGKATETELAGETWQD
LGPYLAMLLIIPMLMSFRQGLLTLMLSPSLLLATAMTLSLANSQPAQASVWQGLWKTKDQ
QAQSAFEQGEFSQAAETFENPQWQASAQYKAGNYQQALEGFEQDSSAQGLYNQGNALMQL
EDYQEAIKRYQQAIAAQSQFTEAEQNLALAQQLLEQQKESSDQQSDKSEQDPSKSNDDNS
TPEQSSDKNESQQADSDESQSGQQESQQGQQDQSGQQNQQQNSENQSDNKNDRSSDNNKP
QSQSDQPSDRDEQKDDKQSESSQNEPQQQNDQQQNSSDQQSSTSEDNNTSQQDDSTQDSP
ASNESSMQASATENGEQQDAGNQKMGAAPSSIEPNTEDMKDSKPSEMISASQINQDDLPA
DMQRALRAINEDPQVLIRNKMQLEYQKRRQNSQPPKENEQW
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atgatccattttattcgccctgaatggctattggggttcattccagtattgatattaagt
gcattattttggcgtaaacatagccaacaatcagcatggaagcagtatatcgccccacat
ttaagtcagttgcttatcagccaaactgttgagaaaagtcatcagcccaaatggctatta
attgtctgttggatcatcgccgttattgcgctttcagggccggcattaaacaaacaaaat
ctgccggtatttgctaccgaacaaggtcgagtactcattatggatatgtctcagtccatg
tatgccaccgacttaagtccaaatcgtttgtcctacgctaaatttagagcgaccgactta
ttaaatgaattaaaagaaggcgaaacagggttgattgcctatgctggtgatgcttatacc
attagcccgttaacacgcgacagtgataccattttaaacttactgccaacattatcaccc
gatattatgcccactaaaggatctaacttagcagcggcgttatctctagcagaaaaacta
ttggctcaaggtggccatgtcagtggcgatattattgttatgacagatggcatttctgca
caacaatttaatcaagcaagcagtgcacttaacagccgttaccgtttatcgatcatggct
tttggcagtaaacaaggtgcgccaattcgcttagctgatggtcaattactgcgtgatagt
agtaatgaagttgtcgtcgctaaaaccgattacggtctattacaaaaactaacccaacaa
catcaagggatcctagtaccggcccaaaccgatggcagcgatgtgtccactctaaccaac
tggctggcaactgatggtaaggcaacagaaactgagcttgctggcgagacttggcaagat
ctgggtccatatttagccatgttattaattatcccgatgttaatgagtttcagacaagga
ttattaaccctcatgcttagccctagcttactactcgctactgcaatgactttgagtcta
gccaacagtcagccagcacaagcctctgtgtggcagggcttatggaagactaaagaccaa
caggcacagtcagcatttgaacaaggtgaattttcacaagcagcggaaacattcgaaaac
cctcaatggcaagcatcggcacaatacaaagccggtaattatcaacaagcactcgaagga
tttgagcaagatagcagcgcccaaggtttatataaccaaggtaatgccctgatgcaactg
gaagattatcaagaggctattaagcgttatcaacaagccattgcggctcaatcacagttt
actgaggcagaacagaatttagccttagcccagcaattgcttgaacaacaaaaagagtca
tcagatcaacaatctgataaatcagagcaagatccatctaaatcaaatgatgacaactct
acaccagaacaatcttctgataaaaatgaatctcaacaagcagattccgacgaatcacag
tctggtcaacaggaaagccaacaaggtcaacaagaccaatctggccaacaaaaccaacag
cagaactctgaaaaccaatcagacaataaaaatgatcgttcatctgataataataaaccg
caatcacaaagtgatcagccatcagaccgcgatgaacaaaaagatgataaacaatccgaa
tcgtcacaaaacgaaccacaacagcaaaatgatcagcaacaaaatagctcagatcaacaa
tcatcaacctctgaagataacaacacttcacaacaagatgattcaacgcaagattctcca
gctagtaacgaatctagcatgcaggccagtgcgactgaaaatggagaacaacaagacgct
ggcaaccaaaaaatgggagctgcaccgtcttcaatagagccaaatacagaagacatgaaa
gatagtaaaccatcagaaatgatctcggcttcacaaataaatcaagatgatttacctgca
gatatgcaacgtgctcttcgcgccataaatgaagatccacaagtattaatccgcaataaa
atgcagcttgaatatcaaaaacgtcgtcaaaatagtcaaccgcctaaggaaaatgaacag
tggtaa
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