Shewanella frigidimarina: Sfri_2717
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Entry
Sfri_2717 CDS
T00395
Name
(GenBank) TRAP dicarboxylate transporter, DctM subunit
KO
K11690
TRAP-type transport system large permease protein
Organism
sfr
Shewanella frigidimarina
Pathway
sfr02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
sfr00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Sfri_2717
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sfr02000
]
Sfri_2717
Transporters [BR:
sfr02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
Sfri_2717
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DctM
Motif
Other DBs
NCBI-ProteinID:
ABI72557
UniProt:
Q07ZK7
LinkDB
All DBs
Position
3267304..3268701
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AA seq
465 aa
AA seq
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MTIATLFIALFICMMIGMPIAIALGFSSMLTILLYSNDSLASIVLKLYESTSEHYTLLAI
PFFILSSAFLSTGGVARRIIDFAMDSVGHIRGGLAMASVMACMLFAAVSGSSPATVAAIG
SIVIVGMVRAGYPEKFAAGVITTSGTLGILIPPSIVMLVYAAATEVSAARMFMAGLIPGL
MMGCILMLAIYIVARIKKLPSRPFPGIKALSISSAKAMGGLALILIVLGSIYGGVASPTE
AAAVACVYAYFIAVFGYRDIGPLKNVAWRNKQESLIGASLRNIGHMLLAVIKTPTDKEIR
HVVRDGAKVSIMLLFIIANAMLFAHVLTTERIPHIIAETIVGFGLPAWGFLIIVNLLLLA
AGNFMEPSAILLIMAPILFPIATQLGIDPIHLGIIMVVNMEIGMLTPPVGLNLFVTAGIT
GKSMGWVIQSCLPWLVLLLGFLMLITYIPQISLFLPEYIDKLNGY
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgactatagcaactctatttatagctttatttatttgcatgatgattggtatgcctatt
gctatcgcattaggtttttcaagcatgctaactattttgttatattcaaatgattcgctc
gcttcaatagttttaaaactgtatgagtcgacttcagaacactacactttattggcaatt
ccattctttattctatcatcggcatttttgtctactggtggcgtagcaagacgtattatt
gactttgcaatggacagcgtaggtcatatacgcggtggtcttgctatggcatcggtgatg
gcttgtatgctgtttgccgcggtatctggttcatcacctgcaacagtggctgctattggc
tctattgttattgttggtatggtacgcgcaggttatccagaaaaatttgcagcaggcgtt
atcactacttcaggtaccttaggcattttaattccaccatcgattgtaatgctggtttat
gcggctgcgacagaagtgtctgccgctagaatgtttatggctggtttaattccaggctta
atgatgggttgtattttaatgttagcaatctacattgttgcacgaattaaaaaactgcct
tcgcgccctttccctggaataaaagcactaagcatatcaagtgctaaagcaatgggtgga
ttagcactcattcttattgtactgggttcaatctacggtggtgttgccagtccaactgaa
gcagctgcggtagcttgtgtgtatgcttactttattgcagtatttggctatcgggatatt
ggaccactcaagaatgttgcttggcgaaataaacaagagtctttaatcggcgcctcatta
cgcaatataggacacatgttgcttgccgttattaaaacgccaaccgacaaagaaatccgt
catgtagtacgtgatggcgctaaagttagcattatgttgttgttcattattgctaatgcc
atgctgtttgctcacgtattaaccaccgagcgtattccacatattattgccgaaacgatt
gtcggatttggattacccgcatggggttttttgatcatcgtcaacttattgttattagct
gcgggtaactttatggaaccttcagctattctgttgattatggcgccaatattattccct
atcgcaacccagttaggtatcgatcctattcacttaggcatcattatggtggtcaatatg
gagataggcatgctcacaccgcctgtagggctcaatctgtttgtcactgcaggaataaca
ggaaaaagtatggggtgggtaattcaatcgtgcctgccttggctggtattgttactcggt
ttcttgatgttgattacctatattcctcaaatttcactatttttacctgagtatatagac
aaattaaacggctattag
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