Shewanella frigidimarina: Sfri_2746
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Entry
Sfri_2746 CDS
T00395
Name
(GenBank) Na+/H+ antiporter NhaC
KO
K18218
tetracycline resistance efflux pump
Organism
sfr
Shewanella frigidimarina
Brite
KEGG Orthology (KO) [BR:
sfr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sfr02000
]
Sfri_2746
01504 Antimicrobial resistance genes [BR:
sfr01504
]
Sfri_2746
Transporters [BR:
sfr02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
Sfri_2746
Antimicrobial resistance genes [BR:
sfr01504
]
Gene variants
Tetracycline resistance genes
Transporters
Sfri_2746
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Na_H_antiporter
Adeno_E3B
Motif
Other DBs
NCBI-ProteinID:
ABI72586
UniProt:
Q07ZH8
LinkDB
All DBs
Position
complement(3301054..3302610)
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AA seq
518 aa
AA seq
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MIISYADSALSVLPPLVAITLAILTRKVLLSLGVGIVFGALLLTDFSLVSSGEYILNTAS
QLVWKDAALNSWNVYILGFLIVLGMITALITVSGSARAFADWAKLRIRNKRDAKLMTMFL
GCVVFIDDYFNSLVVGSISRPITDRYHISRAKLAYILDSTAAPVCVISPVSSWGAYIIAL
IGGILTAHGFTDSGHLSVFIQMIPMNFYAIFSLLLLLCVATFSLDVGPMRQHELNALRGN
LFDESKGQPPGAVTDLPEADTGKVIGLFLPIAVLVFATVYFMVSSGADVLATKDLPFNVL
GAFENTDVSSSLFFGSVIGLIATLILAIQQKVDLSMLLKGMSVGARSMLPAIYILLFAWT
ISSVIGQLETGKYMASLATDNIPFALLPAVLFLLAGITAFSTGTSWGTFGIMLPIAADMA
MGSDSTMMLPMLAAVLSGAVFGDHCSPISDTTILSSTGASCHHIDHVVTQLPYALIAALI
SLVGYTVLGFTGSLIAGLVCCSMLFVISVVVLHFWAKK
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgataataagttatgccgattcggcactttctgttttgccaccacttgtggctattact
ctggccattttaactcgtaaagtattgctctctttaggggttggcattgttttcggcgcc
ttattactgactgatttctcattggttagtagcggcgaatatatcttaaataccgctagc
cagttagtttggaaagacgcagcgctgaatagttggaatgtgtacattctaggctttttg
attgtgctgggcatgatcactgcattaatcactgttagcggctcagcccgtgcttttgct
gattgggctaaattgcgtattcgtaataaacgtgatgccaagttaatgaccatgttttta
ggctgcgttgtgtttattgatgattactttaacagtttagtcgtcggctcgatttcacgt
ccaattactgaccgctaccatatttcgcgtgccaaattggcttatattcttgattccacc
gccgcaccagtgtgtgttatttctcccgtgtctagctggggggcatacattatcgcatta
attggcggtattttaactgcccatggatttaccgattctggccatttgagtgtctttatt
caaatgatcccaatgaacttttatgccattttttcgttattattattactgtgtgtagca
acgtttagcttagatgtaggtccaatgcgtcagcatgaattaaatgcgctgcgtggtaat
ttgtttgatgagtcaaaaggtcaaccacctggcgcagtcacagatttacctgaagccgat
accggtaaagtgattggcttgtttttacctatcgcggtattggtgttcgcgacagtgtat
tttatggtttcaagtggcgccgatgtgctagcaaccaaagacttaccgtttaatgtactc
ggtgcatttgagaataccgatgttagctcgtcactattttttggctctgtaattggtctt
attgcaacacttattcttgcgattcagcaaaaagttgatttgtctatgttactcaaagga
atgtcggttggtgctcgttctatgttaccagccatttacatattgctttttgcatggaca
atttcgagtgtgattggtcagcttgaaaccggtaaatatatggcaagtttagccactgac
aatattccatttgccttactacctgcagtgttattcttgttagcgggtattaccgcattt
tcgactggcacaagttggggcacgtttgggattatgttgcctattgccgcagacatggcg
atgggaagtgatagcacgatgatgttgccaatgttggctgcggtgttatctggtgcggta
tttggcgatcattgttcgcccatttctgacaccaccatattgtcgtcaaccggtgccagt
tgccatcatattgatcacgttgttactcaactgccgtatgccttaattgctgctttaatt
agcttggtcggttacaccgtattaggttttactggctcattaatcgctgggttagtttgc
tgtagcatgttgtttgtcattagtgttgttgtattacatttttgggctaaaaagtga
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