Shewanella frigidimarina: Sfri_2749
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Entry
Sfri_2749 CDS
T00395
Name
(GenBank) histone family protein nucleoid-structuring protein H-NS
KO
K03746
DNA-binding protein H-NS
Organism
sfr
Shewanella frigidimarina
Brite
KEGG Orthology (KO) [BR:
sfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sfr03036
]
Sfri_2749
03400 DNA repair and recombination proteins [BR:
sfr03400
]
Sfri_2749
Chromosome and associated proteins [BR:
sfr03036
]
Prokaryotic type
Nucleoid associated proteins
HNS (histone-like nucleoid structuring protein)
Sfri_2749
DNA repair and recombination proteins [BR:
sfr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Sfri_2749
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Histone_HNS_N
Histone_HNS
PilN
eIF3_subunit
Motif
Other DBs
NCBI-ProteinID:
ABI72589
UniProt:
Q07ZH5
LinkDB
All DBs
Position
3305422..3305832
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AA seq
136 aa
AA seq
DB search
MSDFLDILTHGRRFKAAVKELSLDDLRETAAKLEKIITERQEEEKLELEANAERNARIAE
ILAQIENSGLSIEDLGDVTSSVKTAKTKRAPRPPKYQITVDGELIQWTGQGRMPTVFKQQ
VDSGKNMSEFLIPGME
NT seq
411 nt
NT seq
+upstream
nt +downstream
nt
atgagtgactttttagacatattaacccacggccgtcgttttaaagctgcagtaaaagaa
ttgtctcttgatgatttacgtgaaacagcggcgaaattagaaaaaatcattaccgaacgt
caagaagaagagaaattagaacttgaagccaatgcagagcgtaacgctcgtattgctgaa
attcttgctcaaattgaaaacagtggtttatcaattgaagatttaggtgacgtgacgtct
tctgttaaaacagctaaaaccaaacgtgcaccacgtccaccaaaatatcaaatcactgtt
gatggtgaattaattcaatggactggccaaggtcgtatgcctaccgtattcaaacaacaa
gttgatagcggcaaaaatatgagcgaattcttaattcctggtatggaataa
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