Shewanella frigidimarina: Sfri_2753
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Entry
Sfri_2753 CDS
T00395
Name
(GenBank) prolyl-tRNA synthetase
KO
K01881
prolyl-tRNA synthetase [EC:
6.1.1.15
]
Organism
sfr
Shewanella frigidimarina
Pathway
sfr00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sfr00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Sfri_2753
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sfr01007
]
Sfri_2753
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sfr03016
]
Sfri_2753
Enzymes [BR:
sfr01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.15 proline---tRNA ligase
Sfri_2753
Amino acid related enzymes [BR:
sfr01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
Sfri_2753
Transfer RNA biogenesis [BR:
sfr03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
Sfri_2753
Prokaryotic type
Sfri_2753
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
tRNA_edit
HGTP_anticodon
TIR_2
Motif
Other DBs
NCBI-ProteinID:
ABI72593
UniProt:
Q07ZH1
LinkDB
All DBs
Position
3308026..3309741
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AA seq
571 aa
AA seq
DB search
MRVSKYLLSTQKETPANAEVISHQLMLRAGMIRRNASGLYTWLPSGLRVLRKVEAIVREE
MNKTGAIEILMPLVQPADLWVETGRWDKFGPELLRFQDRNNRDFVLGPTHEEVITDLVRK
ELSSYKQLPLTLYQVQTKFRDEVRPRFGVMRAREFLMKDAYSFHLDQETMDNTYHAMHTA
YSNILTRMGLSFRPVLADTGSIGGSMSHEFHVLANSGEDLIAYSTGSDYAANIEKAESPM
PTHTLAAPTEAMTLVDTPNAKTIAELVEQFNVVITKTVKTLIVKGATDEVPLVALVIRGD
HELNEIKADKLELVASPFEFASETEIRAAVGAGPGSIGPVGLTMPIIVDHSVTVMSDFAA
GANAEDKHYFGINWDRDLPLATAADIRNVVEGEPTPDGLGTYAMARGIEVGHIFQLGTSY
SKSMNATVLDENGKAQVLLMGCYGVGVSRIVAAAIEQNNDDRGITWPEAIAPFTVGILPM
NMHKSHRVADIAEKLYQDLADAGVEVLMDDRKERPGVMFADMELIGLPHVVVIGDRNIDA
GVFEYKNRRTGEKQDIPFDEIVAFLTNAAKG
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atgcgagttagcaagtacctgctttcaacacaaaaagaaacccctgctaatgcagaggtg
attagtcatcagttaatgttacgagccggtatgatccgtcgtaatgcttcaggtctctac
acttggcttccatctggtttacgtgttttacgtaaagttgaagccattgttcgtgaagaa
atgaacaaaacaggtgcgatcgaaatattaatgccgttagtccagcctgcagatctatgg
gttgaaacgggtcgttgggataagtttggtcctgagttattacgtttccaagaccgtaat
aatcgtgacttcgtattggggccaacccatgaagaagtgatcaccgatttagtccgtaaa
gaattaagttcttacaagcaactaccgctaacactttaccaagtacaaactaagttccgt
gatgaagttcgccctcgcttcggcgtcatgcgcgcgcgcgaattcttgatgaaagatgcc
tattctttccatttagatcaagaaaccatggataacacttaccacgctatgcataccgca
tacagcaatattctgactcgtatgggcttatcattccgtccagtactggctgatactggt
tctatcggtggtagcatgtcgcatgaattccatgtgctggctaacagtggtgaagattta
atcgcttattcaacgggtagcgattatgccgctaacattgaaaaagccgaatcaccaatg
ccaactcacactcttgctgcaccgactgaagcaatgacgttagtggatacgcctaacgcc
aaaacgattgctgagttagttgagcaatttaatgtagtcatcactaaaacggttaaaacc
ttaatcgtaaaaggtgctactgacgaagtgccattagttgcattagttatccgtggcgat
cacgaacttaacgaaattaaagccgacaagcttgaattagtcgcatcaccatttgaattt
gcttcagaaacagaaattcgtgctgcagttggagcaggtcctggttctataggacctgtt
ggcttaacgatgccaattattgttgatcatagtgtcactgtgatgagcgattttgccgcg
ggtgctaacgctgaagataagcattattttggtattaactgggaccgcgacttgcctcta
gcgactgctgcggatatccgtaatgtggtcgaaggtgaaccaacgcctgatggcttaggt
acgtatgccatggctcgtggtattgaagtcggccatatcttccagttgggaacaagttat
tctaaatcaatgaatgccactgtgttagacgaaaacggtaaagcccaagtgttattgatg
ggttgttacggcgttggcgtgagtcgtattgtggctgctgctattgagcaaaacaacgat
gaccgtggcattacctggcctgaagctattgcaccgtttactgtaggcattttgccaatg
aatatgcataagtcacatcgtgtagctgacattgccgaaaaactttaccaagacctggct
gatgctggtgttgaagtattgatggatgatcgtaaagagcgtcctggggttatgtttgcc
gacatggagctcattggcttgccgcatgttgtcgtgattggcgatcgcaatattgatgct
ggtgtatttgaatataaaaaccgtcgcacgggtgagaaacaagatattccattcgatgag
attgtggcgtttttaacaaatgctgctaaaggctag
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