Shewanella frigidimarina: Sfri_2783
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Entry
Sfri_2783 CDS
T00395
Name
(GenBank) transcriptional regulator, LysR family
KO
K03566
LysR family transcriptional regulator, glycine cleavage system transcriptional activator
Organism
sfr
Shewanella frigidimarina
Brite
KEGG Orthology (KO) [BR:
sfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfr03000
]
Sfri_2783
Transcription factors [BR:
sfr03000
]
Prokaryotic type
Helix-turn-helix
LysR family
Sfri_2783
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_30
HTH_5
Motif
Other DBs
NCBI-ProteinID:
ABI72623
UniProt:
Q07ZE1
LinkDB
All DBs
Position
complement(3348361..3349272)
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AA seq
303 aa
AA seq
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MSRRLPPLNAVKAFEAAARHLSFTRAAEELFVTQAAVSHQIKALEDFLGLKLFRRKNRSL
LLTEEGQSYFLDIKDIFIELGEATNRLLARSAVGSLTVSMSPSFAIQWLVPRLAKFSEKN
PDIDVRIKAVDSDASSLTDDVDVAIYYGQGNWPGLRADKLRNEVLIPVCSPLLLNGPKPL
IQPSDLKLHTLLHDSSRQDWQAWFRQCGVTDINVNQGPIFSHSSLVLQAAAHGQGVALGY
SVLARPDIKAGRLVCPFSEVLVSKDAYYLVCQQNHSEIGKISAFREWMVDMFAEESRSEL
LTG
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgtctagacgattacctcctttgaatgcagttaaagcatttgaagctgcagcacgacat
ttgagctttacccgcgccgcagaagagttgtttgtcactcaggctgcagtgagtcatcaa
attaaagcattagaagattttttagggctaaaactgtttaggcgtaaaaatagatcatta
ttgttaacagaagaaggccaaagctattttctggacattaaagacatttttattgagctc
ggcgaggcgactaatcgcctgcttgcccgaagcgcggtgggatcgttaacggtgagcatg
tctccgagttttgctattcaatggttagtgcctcgtttagctaaatttagcgaaaaaaat
cctgatattgatgtgcgtattaaagcggtagacagtgatgccagttcgttaacggatgat
gtcgatgtggctatttattacggtcaaggtaattggcctggactacgtgctgataaactg
cgtaatgaagtgctgattcccgtatgttcgccattattactcaatggtcctaagccatta
attcagcctagtgatttaaaactccacactttattacatgattccagccgtcaagattgg
caggcatggtttaggcaatgtggcgtaactgacatcaatgtcaatcaagggcctatattt
agccattcttcattggtactacaagcagctgcgcatggccaaggtgtggcattaggatat
agcgtactagcaagacctgatatcaaagcagggcgcttagtgtgcccgttttctgaggtg
ctggtgagcaaagatgcttattatttagtgtgtcagcaaaatcattctgaaataggtaaa
atttcagcttttagagagtggatggttgatatgtttgcagaggagtcgcgtagtgagttg
cttaccggataa
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