Shewanella frigidimarina: Sfri_2788
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Entry
Sfri_2788 CDS
T00395
Name
(GenBank) Exodeoxyribonuclease VII small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
sfr
Shewanella frigidimarina
Pathway
sfr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sfr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
Sfri_2788
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sfr03400
]
Sfri_2788
Enzymes [BR:
sfr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
Sfri_2788
DNA repair and recombination proteins [BR:
sfr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
Sfri_2788
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
KxDL
TACC_C
DASH_Dad2
DUF6730
DUF6687
SlyX
Motif
Other DBs
NCBI-ProteinID:
ABI72628
UniProt:
Q07ZD6
LinkDB
All DBs
Position
3353722..3353958
Genome browser
AA seq
78 aa
AA seq
DB search
MAKKPENLSFEQSLTELETIVAHLEQGEVSLDDALKQFERGIKLVRQSQAKLEQAQQKVS
ILLNEDDAELASFTVESE
NT seq
237 nt
NT seq
+upstream
nt +downstream
nt
gtggctaaaaaacctgaaaatctcagttttgaacaatcattaactgaacttgaaaccatt
gttgctcatttggagcaaggtgaagtgtcgctggatgatgcacttaaacagtttgagcgc
ggcattaagttagttcgtcaaagccaagccaaacttgagcaagcacagcaaaaagtctct
atcttattaaatgaagatgatgccgaattagcgtcgttcactgtagaaagtgaataa
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