Shewanella frigidimarina: Sfri_2789
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Entry
Sfri_2789 CDS
T00395
Name
(GenBank) farnesyl-diphosphate synthase
KO
K00795
farnesyl diphosphate synthase [EC:
2.5.1.1
2.5.1.10
]
Organism
sfr
Shewanella frigidimarina
Pathway
sfr00900
Terpenoid backbone biosynthesis
sfr01100
Metabolic pathways
sfr01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
sfr00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
Sfri_2789
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
sfr01006
]
Sfri_2789
Enzymes [BR:
sfr01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
Sfri_2789
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
Sfri_2789
Prenyltransferases [BR:
sfr01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
Sfri_2789
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
DUF6307
Motif
Other DBs
NCBI-ProteinID:
ABI72629
UniProt:
Q07ZD5
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All DBs
Position
3353998..3354879
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AA seq
293 aa
AA seq
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MLAEAITTYQNRVNGILNQHLTLLDDAAPDLKAAMLHGALLGGKRIRPFLVYSVGDMLGV
NINALDKAAAAIECIHAYSLIHDDLPAMDNDALRRGQPTVHIAFDEATAILAGDALQTLA
FEIITAPCNDLHPKQQLAMVRVLAKASGYQGMCGGQAIDLSATDHSINLDRLTELHNKKT
GALISCAVELALIAADVPDEHYKLMMKYAHTLGLAFQVQDDILDITASTEELGKPQGSDQ
QSNKSTFPKLLGLDGAKACAEQLIQDALSALTKLPYNSQLIADFAHYIIERRL
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
gtgttagctgaagcaataacaacataccaaaatcgcgttaatggaattcttaaccaacat
ttaacgctgctcgatgacgctgcaccagatttaaaagcagcgatgctgcatggcgcgcta
ttgggcgggaaacgcataagaccatttttggtctacagtgtaggtgacatgttaggcgtt
aacattaatgcacttgataaagccgctgctgccattgagtgtattcatgcctattcgtta
atacacgatgacttaccggcaatggataacgatgctcttcgtcgtggccaacctactgtg
catattgcatttgacgaagccaccgctattttagccggtgatgcattgcaaacattggct
tttgaaattatcacagccccttgtaatgacttacatccgaagcaacaactggcgatggtc
agagtactcgcgaaagcatcaggctatcagggtatgtgcggtgggcaagcgattgatttg
agtgctacagatcacagtataaatttagaccgattaaccgaattacataataaaaaaacc
ggagcgttaatcagttgtgcggttgagcttgccttaattgctgctgacgtacccgatgag
cattacaaattaatgatgaaatatgcccatacgcttgggctagcttttcaagtgcaagat
gatattttagatattaccgctagcaccgaagagctaggcaaaccacaaggcagcgatcag
caatcgaataaaagcactttcccgaaactattaggtctcgatggtgccaaagcctgtgca
gaacaactaatacaagatgcactatcagcgctgactaaattaccatacaatagccagtta
attgcagacttcgcccactacattattgagcgaagattataa
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