KEGG   Shewanella frigidimarina: Sfri_2983
Entry
Sfri_2983         CDS       T00395                                 
Name
(GenBank) Peptidoglycan-binding domain 1 protein
  KO
K02450  general secretion pathway protein A
Organism
sfr  Shewanella frigidimarina
Brite
KEGG Orthology (KO) [BR:sfr00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:sfr02044]
    Sfri_2983
Secretion system [BR:sfr02044]
 Type II secretion system
  General secretion pathway protein
   Sfri_2983
SSDB
Motif
Pfam: AAA_22 AAA_16 PG_binding_1 AAA_30 SLFN-g3_helicase AAA_5 Sigma54_activ_2 AAA AAA_19 AAA_14 nSTAND3 GspA_C39-like TrwB_AAD_bind AAA_7 TsaE Sigma54_activat ABC_tran Tas3-like_N cobW AAA_11 AAA_25 Peptidase_C39 AAA_18 AAA_24
Other DBs
NCBI-ProteinID: ABI72822
UniProt: Q07YU2
LinkDB
Position
complement(3583737..3585410)
AA seq 557 aa
MYKAFYGLNDNPFSIAPNPHYMFLSDRHREALAHLTYGLGETGGFVLLTGEVGTGKTTVS
RCLLQQIPDNTDTAFILNPSLTELELLATLCDELEIKYGDNPTLKQLTDLISMYLLNNHK
NGRNTVLIIDEAQHLRSEVLEQLRLLTNLETNTKKLLQVILIGQPELQQLLKRQDLRQLA
QRITARYHLLPLNKDEIALYVLHRLQVAGRHEPLFTRKAITALHKHSGGIPRLTNLLCER
ALMAGYGQAKVPIDHKMVNQAAVEVLGDIDVPGDKRWPFIAATALVLAFGLSFYLFNRSA
FENNMSANAAIADVQAQSSLANQTPASMPSKINQAAQTQPQQVQAATPVANAQQQIMRQA
MLQSSSIDNAFAGLFGLWNKQPIIGLSACQAAQQQDLACYQQQGNWHSIMRLNYPAVAYL
QDAQANVFYGVIVERQAEQILLQLGEQQFWVNKDWFDRHFSGTFEILWQPDSILPREIGQ
SSSLAQVQWLENSLALVNKRRARLLTQFDSELEQQLMTFQRQHGLKPDGIAGNQTLVQLN
LYLSQQGPRLSASEVRS
NT seq 1674 nt   +upstreamnt  +downstreamnt
atgtataaagccttctatggattaaacgataacccattttctatcgcgcctaaccctcat
tatatgttcttaagtgaccgccatcgtgaggcgttggctcatttaacctacggccttggt
gaaaccggtggttttgtattattaacgggtgaagtcggcactggaaaaaccactgtttct
cgctgcttattacaacaaattcccgataataccgataccgcgtttattcttaacccatca
ttgactgagcttgaactcttggccacgctatgtgatgagctggaaattaagtacggtgat
aatccgacgttaaaacagctgacagatttaatcagcatgtacttactgaataatcacaaa
aatggtcgtaatacggtgctgattattgatgaagcacagcatctgcgttctgaagtatta
gaacagctgcgtttattgaccaatttagaaactaataccaaaaaactgctgcaagtgatt
ttgattggccagcccgaattacaacaactgctaaagcgccaagacttacgtcagttagca
cagcggatcactgctcgctatcatttactaccgctaaataaagatgaaattgctttatat
gtgctgcatcgtttgcaggtggctggtaggcatgagcctttatttacgcgtaaagcgata
accgcattgcataaacattctggcggtattccgcgtttaaccaacttattatgtgaacgt
gcattaatggctggttatgggcaagctaaggttccgatcgatcataaaatggttaatcaa
gcggctgtcgaagtattgggtgatattgatgtacctggcgataaacgctggccatttatt
gccgctacagcgttagtgctcgcttttggtttatcattctatctgtttaatcgttcagcc
tttgaaaacaatatgagtgccaatgcggcgatagcagatgttcaagcgcaatctagtcta
gccaatcaaacgcctgcatctatgccaagtaagataaaccaagctgcacaaactcagcct
cagcaagtacaagcagcaactccagttgccaatgcacaacaacaaattatgcgtcaagcc
atgctacaaagcagtagcattgataatgcctttgccggattattcggcttgtggaataaa
caacctattatcggcttgtctgcttgccaggcggcacaacaacaagatttagcctgttac
cagcaacaaggtaattggcacagtattatgcgccttaattaccctgcggttgcttacttg
caagacgcacaagcgaatgtgttttatggcgtaattgttgagcgtcaagccgagcagatc
ctactgcaattaggcgagcaacagttttgggtgaataaagattggtttgaccgccacttt
agcggcaccttcgaaattttgtggcaaccagacagtatcttaccgcgagaaattggccag
tcttctagtttggcgcaagtacaatggcttgaaaatagcttagcgttagttaacaaacga
cgtgcacgactactgacacagtttgatagtgaattagagcaacaattaatgacttttcaa
cgtcaacatggtttaaaaccagacggtatagcaggcaatcagactttggtgcaacttaac
ttatatttgagccagcaaggcccacgtttaagtgcctctgaggtgcgcagttaa

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