Shewanella frigidimarina: Sfri_2995
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Entry
Sfri_2995 CDS
T00395
Name
(GenBank) DNA primase
KO
K02316
DNA primase [EC:
2.7.7.101
]
Organism
sfr
Shewanella frigidimarina
Pathway
sfr03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
sfr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Sfri_2995
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sfr03032
]
Sfri_2995
Enzymes [BR:
sfr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.101 DNA primase DnaG
Sfri_2995
DNA replication proteins [BR:
sfr03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
Sfri_2995
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNAG_N
Zn_ribbon_DnaG
DnaG_DnaB_bind
Toprim_2
Toprim
Toprim_4
DnaB_bind
Toprim_3
Motif
Other DBs
NCBI-ProteinID:
ABI72834
UniProt:
Q07YT0
LinkDB
All DBs
Position
3593898..3595625
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AA seq
575 aa
AA seq
DB search
MAIPRDFINELIARIDIVDLIDRKVPLKKAGKNHSACCPFHSEKSPSFTVSRDKQFYHCF
GCGAHGNAIDFVMEYDRLEFVDAIEELAGQLGLAVPREQGTGKRPDQGLSRDLYELMEEA
NLFYQSQLRQHTDKQKVVDYLEFRGLSSDVVEQFGIGFAPDGWDGLLGRYRQNLPAQDKL
LTAGMLIANDSGKRYDRFRDRLMFPIRDRRGRVVGFGGRVLGDGTPKYLNSPETPIFHKG
NELYGLYELKQKHRDPQHVLIVEGYMDVVALAQFGIDYAVASLGTSTTAEQFQLLVRSAK
QVVCCYDGDRAGREAAWRALETALPLLKPGDQVKFMFLPQGEDPDTMVRKIGKEAFEALM
QKAMLLPEFLFDTLSANHGTDKGALAKQAIALIEKVQDTVLQNLLLENLAHKLGMNSSED
LKKKLGFTVKQAKPLNAKGLQGRGTPLRLAIALLVQNPSLGFGLAKQPALDRLQMTGIEL
LNHLLDITREQTLNSAQLLEMHREHNQKSTLIKLAQWEHQVADENVLPEFKQTLIWLNNQ
YIEQRYQELSLKQALTKVEKMQLTKLISIMKGIAK
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atggcgatacctcgtgattttatcaatgagctaatagctcgaatagacatagtcgatctc
attgaccgtaaagtgccgttgaaaaaagccggtaagaaccattcggcttgttgtcctttt
catagcgaaaaatcaccctcttttaccgtcagcagagacaaacagttttaccactgtttt
ggttgcggtgcccatggcaatgctattgattttgtcatggaatatgatcgcctagaattt
gttgatgccattgaagaacttgcaggtcaacttggtcttgccgtaccacgagagcaaggc
acaggaaaaagaccagatcaaggattaagtcgagacttatacgaactgatggaagaagct
aacctcttctatcaaagccaacttaggcagcatacagacaaacaaaaagttgtcgattat
cttgagtttcgcggattatcgagtgacgttgttgagcagttcggtattgggtttgccccc
gatggttgggatggtttactgggtcgttacaggcaaaatttgcccgcccaagataaatta
ctaaccgcaggcatgttgattgccaatgatagcggtaaacggtacgaccgttttcgcgac
agattaatgttcccaatacgcgaccgtcgtggtcgtgtggttggatttggtggtagagtt
ttgggtgacggcaccccaaagtacttgaattctccagaaacgcccatatttcataagggt
aatgaactttatggtttatatgagctaaagcaaaaacaccgtgatccacaacatgtgtta
attgttgaagggtatatggatgtcgtcgcactcgcccaatttgggattgattatgcggtt
gcatctctaggtacatcgactacagctgaacaatttcagcttttagtgcgtagtgcaaaa
caagtggtttgttgttatgacggtgaccgcgcaggccgcgaagcagcttggcgtgcacta
gaaacagcgctaccgctgttaaaaccgggtgaccaagtcaagtttatgtttctaccgcaa
ggtgaagaccctgacactatggtccgcaaaattggcaaagaagcattcgaagcattaatg
caaaaagccatgttactgcccgagtttttgtttgacacattaagtgctaaccacggtacc
gataaaggggcattagccaagcaagccattgcgctaatcgaaaaggtacaagataccgtc
ctacagaatttactgttagaaaatttagcacacaaattaggcatgaacagtagcgaagat
ttaaagaaaaaattaggttttactgtaaaacaagcaaaaccattaaatgcgaaaggctta
caaggtcgtggcacgccattaagattggccattgccctgctggtccaaaatccaagttta
ggctttggtttggccaaacagcctgcactagatcgattacagatgaccggcatagaattg
ctcaatcatttgttagatataactcgagagcagacgttaaacagcgcacaactacttgaa
atgcatagagagcataatcaaaaaagcactctaataaagctagcccaatgggaacatcaa
gtggcggatgaaaacgtattgccagagttcaagcaaaccctgatttggttaaacaaccaa
tatattgaacaacgatatcaggaattaagcctaaaacaggctttaacgaaagttgaaaaa
atgcagctaacaaagctgatttctataatgaaaggcatagcgaagtaa
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