Shewanella frigidimarina: Sfri_3005
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Entry
Sfri_3005 CDS
T00395
Name
(GenBank) FAD dependent oxidoreductase
KO
K09471
gamma-glutamylputrescine oxidase [EC:1.4.3.-]
Organism
sfr
Shewanella frigidimarina
Pathway
sfr00330
Arginine and proline metabolism
sfr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sfr00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
Sfri_3005
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Gene cluster
GFIT
Motif
Pfam:
DAO
Thi4
FAD_binding_3
NAD_binding_8
Pyr_redox_2
FAD_binding_2
Pyr_redox_3
HI0933_like
Amino_oxidase
MurD-like_N
UDPG_MGDP_dh_N
GIDA
FAD_oxidored
Lycopene_cycl
Pyr_redox
NAD_binding_7
Shikimate_DH
KARI_N
Motif
Other DBs
NCBI-ProteinID:
ABI72843
UniProt:
Q07YS1
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Position
complement(3608965..3610251)
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AA seq
428 aa
AA seq
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MSATPHASSYYAASANDKVERPRLESTIETDVCVIGAGYTGLSSALHLLESGMKVVVLEA
ARIGWGASGRNGGQIVNSFSRDIDSIEGVVGKEQAKLFGQMAFEGGQIIRDRIAKYNIDC
DLKDGGVFAAMNAKQMGHLQSQKSLWEAHGHNNQLELLDQDGIRKVVNTDLYVGGLLDKS
GGHIHPLNLALGEARAVESLGGLIFEDSAVIKVDDGASPVVHTAQGQVKCKFVVVAGNAY
LGKLLPELQAKSMPCGTQVITTEPLSDEMAASLLPQDYCVEDCNYLLDYYRLTGDKRLIF
GGGVVYGARDPANVEALIMPKLLKTFPQLKGIKVDYAWTGNFLMTLSRLPQVGRIGDNIY
YSQGCSGHGVTYTHLAGKLIAEMLNGQATRFDAFAALPHYPFPGGHALRVPFSALGAWYY
TLRDKFGI
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgtccgccacacctcatgctagttcatattatgctgcatcggctaatgataaagtcgaa
cgtcctcgcttagaatctacaattgaaacagatgtttgtgttattggcgcgggctataca
gggttgtcttctgcgttacatttattagaaagcggcatgaaagttgtggtgcttgaagcg
gccagaattggctggggagcatctggtcgaaacggcggtcaaattgtcaattcttttagt
cgtgacattgattctatcgaaggcgttgtcggcaaagaacaagctaaactttttggtcaa
atggcgttcgaaggtggtcagattattcgtgaccgtattgccaaatacaacattgattgc
gacttaaaagatggtggtgtttttgccgccatgaacgccaagcaaatgggccatttacag
agtcaaaaatcattatgggaagctcatggtcataacaatcaattagagttactcgaccag
gatggcattcgcaaagtggttaataccgatttatatgtcggtggtttactcgataaaagc
ggtggccatattcatcctctcaaccttgcattaggtgaagcccgtgcggtggaatcactt
ggtggactgatttttgaagattctgcggttattaaagtggacgatggtgcgtcaccggtt
gtgcacactgctcaaggccaggttaagtgtaaatttgtggtggtggctggtaatgcttat
ttaggtaaattgctgccagagctacaagctaaatcaatgccttgtggtactcaagtgatt
accactgaaccattgtcagatgaaatggctgcgagtctattaccgcaagactattgcgtt
gaagactgtaactacctattagattattaccgccttactggtgataaacgccttattttt
ggtggcggcgtggtttatggtgcgcgcgatccggccaacgttgaagccttgattatgcct
aaactattaaagactttcccgcagttaaaggggattaaagttgactatgcttggactggt
aactttttaatgacgttatcgcgtctgccgcaagtgggccgtattggggataatatttat
tactcacaaggctgtagcggtcatggggttacctatactcatttagcaggtaagttaatt
gccgaaatgcttaatggccaagccacacgttttgatgcctttgccgcattaccacattat
ccatttcctggcgggcacgcacttagagtgccatttagtgccttaggtgcgtggtattac
acgttacgtgacaagtttggcatatag
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