Shewanella frigidimarina: Sfri_3139
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Entry
Sfri_3139 CDS
T00395
Name
(GenBank) isocitrate lyase
KO
K01637
isocitrate/methylisocitrate lyase [EC:
4.1.3.1
4.1.3.30
]
Organism
sfr
Shewanella frigidimarina
Pathway
sfr00630
Glyoxylate and dicarboxylate metabolism
sfr00640
Propanoate metabolism
sfr01100
Metabolic pathways
sfr01110
Biosynthesis of secondary metabolites
sfr01120
Microbial metabolism in diverse environments
sfr01200
Carbon metabolism
Module
sfr_M00012
Glyoxylate cycle
sfr_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
sfr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
Sfri_3139
00640 Propanoate metabolism
Sfri_3139
Enzymes [BR:
sfr01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.1 isocitrate lyase
Sfri_3139
4.1.3.30 methylisocitrate lyase
Sfri_3139
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Gene cluster
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Motif
Pfam:
ICL
PEP_mutase
Motif
Other DBs
NCBI-ProteinID:
ABI72976
UniProt:
Q07YD8
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Position
3756977..3758557
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AA seq
526 aa
AA seq
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MTHYKNNIDEAATLINSEGSAWNAINPESVARMRLQNRFKTGLDIAKYTAKIMREDMDNY
DKDTSQYTQSLGCWHGFIAQQKMISIKKHLLTTKRRYLYLSGWMVAALRSEFGPLPDQSM
HEKTSVAALIKELYTFLRQADARELGGLFRELDSAKESDKAAIQHKIENFETHVVPIIAD
IDAGFGNEEATYLMAKQMIEAGACCIQLENQVSDVKQCGHQDGKVTVPHVEFLAKINAVR
YAFLELGIDDGVIVARTDSLGAGLTQKIAVTKEAGDLGDLYNSFLEVEAVDAAKLENGDV
VFKQGGKLVKPARLPNGLFKFRAGTGEERCVLDCITSLQNGADLLWIETEKPHVSQIGGM
VNEIRKVVPNAKLVYNNSPSFNWTLNFRQQVFDAMQKAGQDVSAYDRAQLMSVDYDGTEL
AIQADEKIRTFQSDSAREAGIFHHLITLPTYHTAALSTDNLAKEYFGDQGMLGYVANVQR
KEIRQGIACVKHQNMAGSDIGDAHKEYFSGDQALKASGKDNTMNQF
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgactcactacaaaaataatatcgatgaagctgccaccttgattaattcagaaggtagt
gcatggaatgccatcaacccagagtcagtcgctcgtatgcgtctacaaaatcgctttaaa
actgggttagatatcgcaaaatacactgccaagatcatgcgtgaagacatggacaactac
gacaaggacacatcgcagtacactcagtctttaggttgctggcatggttttatcgcccaa
caaaaaatgatttcgattaaaaaacaccttttaaccaccaagcgtcgttacttatatctt
tcaggttggatggtagctgcactacgtagtgagtttggtccattaccagaccaatctatg
catgaaaaaacctctgttgctgcgttgattaaagagctatacaccttcctacgtcaagct
gatgctcgtgaactaggtggtctattccgcgaattagatagtgccaaagagtcagataaa
gccgcaattcaacacaaaattgaaaacttcgaaacccacgttgtacctattattgccgac
attgatgccggttttggtaacgaagaagccacttacttaatggcaaaacagatgattgaa
gccggtgcttgttgtattcaattagaaaaccaagtatcagatgtaaaacagtgtggccac
caagacggtaaagtcaccgtgccacatgttgaatttttagcaaaaattaatgcggttcgt
tatgcatttttagaactcggtatcgatgacggtgtgattgttgcgcgtaccgattcatta
ggtgcaggcttaactcaaaaaattgctgtcactaaagaagctggcgatctaggcgattta
tacaatagcttccttgaagttgaagccgttgatgcagcaaaacttgaaaatggtgatgtg
gtattcaagcaaggtggcaaactggtgaaaccggctcgtctaccaaatggcttatttaag
ttccgtgctggtacgggtgaagaacgttgtgtacttgattgtattacttcattgcaaaat
ggcgctgatttattgtggattgaaactgaaaagcctcatgtatctcaaatcggtggcatg
gttaacgaaatccgtaaagttgttcctaatgccaagcttgtgtataacaactcgccatcg
tttaactggacgcttaacttccgtcagcaagtatttgatgcgatgcaaaaagcaggacaa
gacgtttcagcttacgaccgcgcgcaattaatgagtgttgattacgatggcactgagctt
gctatccaagctgatgaaaaaattcgtacattccaatctgactcggcccgtgaagcaggt
attttccatcaccttattacactaccgacttaccatactgcagcattatctaccgataac
ttggctaaagaatacttcggtgaccaaggcatgttgggttatgttgccaatgttcaacgt
aaggaaatccgtcaaggtatcgcctgtgttaaacatcaaaacatggctggttcagatatc
ggtgatgcacataaagagtacttctctggtgaccaagcgcttaaagcgtctggtaaagac
aacacaatgaaccagttctaa
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