Shewanella frigidimarina: Sfri_3242
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Entry
Sfri_3242 CDS
T00395
Name
(GenBank) Tetratricopeptide TPR_2 repeat protein
KO
K09859
uncharacterized protein
Organism
sfr
Shewanella frigidimarina
Brite
KEGG Orthology (KO) [BR:
sfr00001
]
09190 Not Included in Pathway or Brite
09194 Poorly characterized
99997 Function unknown
Sfri_3242
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Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
Glyco_hydro_3_C
Motif
Other DBs
NCBI-ProteinID:
ABI73078
UniProt:
Q07Y36
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Position
3878647..3880017
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AA seq
456 aa
AA seq
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MLRTFCIGLTLSLGLSGCAFNSVFVNYPSQIAPYKQQLNSDSPTAKITDLADNISGNDGL
LYAQESGRIMQIAGDFTGSKTYYQQAIDDYQIFDDKAIVSASKLGAGASSILLNDNAIPY
RGPGYERIMLHQYQAFNYLFSGDAQGALVEVRRSNELQSMEQARYQKSQKSVQDMANGTI
DAQVAQLSKEAGNVTSSFLNAYSYYTTGLLHELASEPNDAFIDYRKAAQITPDNVYLQQD
LVRLAKQLGMPQYDEFKRRWGEAVMPTPDQGQVVFIIERDFVPEKQSITVPFPLNGNIQS
ASLATYQPQRLLMNNSQIQGLGTPLTAQTIANIDALAINALKEDLPAALFRQAARIYAKY
QMNRSVQSSSQRANNQVDAAAMVMQIFNVITEQADRRSWLTLPRQAQIARQFIDAGSYNV
RLNSSQNVNIDVKPNRTTLIWAIETGNRTRFYSIII
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgttaagaacattctgtattgggttgactctcagtcttggcctatctggttgtgccttt
aatagtgtgtttgttaactatccatcgcaaatagcgccatacaagcaacaactcaatagc
gattcaccaacagcaaaaatcactgatttggccgacaatattagcggcaatgatggctta
ctttacgcccaagaatctgggcgtattatgcagattgcgggtgactttactggcagtaaa
acctattaccagcaagccattgacgattaccagattttcgatgataaagccatcgtgagt
gcgagtaagttaggcgctggggcaagcagtattttactcaacgataatgccattccttac
cgaggcccaggttatgagcgcattatgttgcatcaatatcaggcgtttaattatttattt
agtggtgatgctcaaggggcattagtagaagttcgccgcagtaatgaactgcaaagcatg
gaacaagcacgctatcagaaatcacaaaagtcagtgcaagacatggccaatggcaccatt
gacgcgcaagtagcccaattaagcaaagaagccggcaatgtcaccagttcatttctaaac
gcttacagctattacactactggtttgttgcacgaactcgccagcgagcctaatgatgcg
tttattgattaccgaaaagcagcacaaattaccccagacaatgtgtatttacagcaagat
ttagtccgtttagctaaacaactggggatgcctcaatacgacgagtttaaacgtcgctgg
ggagaggcggtaatgcctacacccgatcaaggccaagttgtatttattattgaacgtgat
tttgtaccagaaaaacagagtattacggtaccttttccacttaacggtaatattcaatca
gcatcattagcgacctatcagccacaacgtctgttaatgaataacagccaaatccaagga
ttaggcacgccactaacagcacaaaccattgctaacattgacgcgctagcaattaatgca
ttaaaagaagatttacccgctgcgctgtttagacaagcagcaagaatttatgctaaatac
caaatgaatcgcagtgtacaaagcagcagccaacgagccaacaatcaagtagatgctgct
gcgatggtaatgcaaatatttaatgttatcaccgagcaagccgaccgtagaagttggtta
accctgcctcgccaggctcaaattgctcgacaatttatcgatgccggcagctataatgtt
cgcttaaatagcagccaaaatgtaaatattgacgtaaaaccaaaccgtacaacattaatt
tgggcaatagagactggaaatcgtacccgtttttattcgataatcatctga
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