Shewanella frigidimarina: Sfri_3284
Help
Entry
Sfri_3284 CDS
T00395
Name
(GenBank) ABC transporter related
KO
K06158
ATP-binding cassette, subfamily F, member 3
Organism
sfr
Shewanella frigidimarina
Brite
KEGG Orthology (KO) [BR:
sfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
sfr03012
]
Sfri_3284
Translation factors [BR:
sfr03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
Sfri_3284
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC_tran_Xtn
AAA_21
SMC_N
MMR_HSR1
AAA_23
RsgA_GTPase
AAA_29
AAA_16
MeaB
AAA_22
KAP_NTPase
ABC_tran_CTD
DUF7623
CCDC138_cc
Motif
Other DBs
NCBI-ProteinID:
ABI73120
UniProt:
Q07XZ4
LinkDB
All DBs
Position
3928215..3930125
Genome browser
AA seq
636 aa
AA seq
DB search
MINISQAQLIRGSKTLLDETSLTIYPGHKVGLVGANGTGKSSLLALILGHLHLDKGEFSF
PSGWQVASVAQETPALDVSALEYVLDGDTEYRDLEAQLEKAQTDNNGNAIALIHGKIDAI
GGYAIKARAGALLAGLGFKDADQSNPVKSFSGGWRMRLNLAQALLCRSDLLLLDEPTNHL
DLDTMYWLEGWIKSYQGTLILISHDRDFIDGIVGEIVHVENHKLNYYKGNYSSFERVRAE
RMAQQQVAFERQQKERSHMQSFVDRFRYKASKAKQAQSRLKALERMAELLPSQVDNPFQM
AFREPEALPNPLVVMENVSIGYEDNTILKQVELNLVPGARIGLLGRNGAGKSTLIKLLSG
QLQAKTGKYQPNPGLNIGYFAQHQVEFLTLDDSPMQHLARLAPASVREQELRNFLGGFGF
NGDMALSPVRPFSGGEKARLVLALVVWQRPNLLLLDEPTNHLDLEMRHALTMALQTFEGA
MVIVSHDRHLLRLSCSDYYLVDQGVVTPFDGDLDDYHQWLLDAAKLAQANNKTDVGASSD
AVDKKQQKRMEAELRQKVSPLKKQQVKLETQQQKINARLAELEIELADGSLYETENKAKM
TNVLNERTTLTQAMDESEMHWLEIQEQIDIFEQDCL
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atgatcaacataagccaagctcagttaattcgcggcagtaaaaccttactcgatgaaacc
tcactgacgatttatcccggacacaaggttggccttgtcggcgccaacggtacaggtaaa
tcatcattgcttgccttgattttaggtcatttacatctagataaaggtgagtttagtttc
ccctcaggttggcaagttgcctctgttgcgcaggaaactccggcattagatgtgtcggca
cttgagtatgtcctcgacggtgacaccgaataccgagatttagaagcccaactagagaaa
gctcaaaccgacaataatggtaatgccattgcgcttattcatggcaaaattgatgcaatt
ggcggctatgccattaaagcgcgagcaggcgcgctattagcaggcttaggatttaaggat
gcagaccaaagtaacccggtaaaaagcttctctggtggttggcgtatgcgtctcaactta
gcccaagcactcttatgtcgttcagacttattgttactcgatgagccaaccaaccactta
gacctagacaccatgtattggttagaaggttggataaaatcttatcaagggacactcatt
ttgatcagccacgatcgtgactttatcgatggcattgttggtgaaattgttcatgttgaa
aatcacaaattaaattactacaaaggtaattactcttcttttgaacgagtgcgcgctgaa
cgcatggcccagcagcaagtagcctttgagcgtcagcaaaaagagcgctcgcatatgcag
tcatttgttgatcggtttcgctataaagccagtaaagctaaacaagcacaaagccgcttg
aaagcactcgagcgcatggccgagttgctgccatcgcaagtagacaatccatttcaaatg
gcctttagagaaccagaagcgctaccgaacccattagtggtaatggaaaatgtctctatt
ggttatgaagataataccatcctgaaacaggttgagttaaatctcgttcctggtgcgcgt
attggtttgttgggtagaaatggtgccggtaaatcaacgctgatcaaactgttatcaggc
caactacaagccaaaacgggtaagtatcaacctaacccaggattaaatattggttatttt
gctcagcatcaagttgaatttttaacgcttgatgattctccaatgcaacacttggctaga
ctcgcgccagcaagtgttcgcgaacaagaattacgtaactttttaggtgggtttggcttt
aatggtgatatggccttatcgccagtacggccgttttctggcggcgaaaaagcccgccta
gtattagcattagtggtttggcagcgtccaaatttactattactcgatgaaccgaccaac
catttagatttagagatgcgtcacgcactcaccatggcattgcaaacctttgagggcgca
atggttatcgtgtcacacgatcgtcacctattacgattaagttgtagtgattattactta
gttgaccaaggtgttgtaacaccttttgatggcgacttagatgactaccatcaatggttg
ctagatgccgctaaactagcacaagccaacaacaaaacagatgtaggcgctagcagcgat
gctgttgataaaaaacagcaaaaaagaatggaagctgaattacgtcagaaagtatcgccg
ctgaaaaaacaacaagtaaagttagaaactcaacagcaaaaaattaatgcccgattagcc
gaattagaaattgagttagccgatggcagcttatacgaaacagagaacaaagctaaaatg
accaatgttctcaacgaacggactacgctgactcaagctatggatgaaagtgaaatgcat
tggttagagattcaagagcagatcgatatttttgagcaagattgcctataa
DBGET
integrated database retrieval system
