Shewanella frigidimarina: Sfri_3346
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Entry
Sfri_3346 CDS
T00395
Name
(GenBank) primary replicative DNA helicase
KO
K02314
replicative DNA helicase [EC:
5.6.2.3
]
Organism
sfr
Shewanella frigidimarina
Pathway
sfr03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
sfr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Sfri_3346
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sfr03032
]
Sfri_3346
Enzymes [BR:
sfr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
Sfri_3346
DNA replication proteins [BR:
sfr03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
Sfri_3346
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DnaB_C
DnaB
AAA_25
ATPase
AAA_33
divDNAB
GvpD_P-loop
nSTAND3
PAXNEB
Gal-bind_lectin
Motif
Other DBs
NCBI-ProteinID:
ABI73182
UniProt:
Q07XT2
LinkDB
All DBs
Position
complement(3993816..3995222)
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AA seq
468 aa
AA seq
DB search
MSQQGAFKARNRQKDVEVNALKLPPHSIEAEQSVLGGLMLDAEAWDRVSEAVVPEDFYSR
SHRMIFTAMQRLMESGQPLDLITVSEQLEIEDQLDDAGGFAYLGEIAKNTPSAGNILSYA
DIVRERAVVRDMIAVAHEIADAGYNPEGRDSSALLDLAETKVFKIAEMRTNANEGPENIK
SILEKTVDRIEQLYNNPHNGVTGVSSGFNDLDKMTAGFQSGDLIIVAARPSMGKTTFAMN
LCEQAAMNEDKPVLIFSLEMPSEQIMMRMLASLGRVDQTKIRTGQLDDEDWARVSSTMGI
MLEQGKMYIDDGSGLTPTEVRSRARRIAREHGGLSMIMIDYLQLMQVPSLKDNRTLEISE
ISRSLKALAKELEVPVIALSQLNRSLEQRADKRPINSDLRESGAIEQDADLIMFIYRDEV
YNDSSEDKGTAEIIIGKQRNGPIGRIRLVFQGQFSRFDNYAGPQFEED
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgtcacagcaaggtgcttttaaagcaagaaacaggcaaaaagatgtagaagttaatgca
ttaaagttgccgccacattcgattgaagcagaacaatccgttttaggtggattgatgcta
gatgctgaagcgtgggatcgtgtttctgaagcggttgtgccagaagatttttattctcgt
tctcatcgaatgattttcacggctatgcaacgtttaatggaatcgggccaaccgctggat
ttaattaccgtatccgaacagctcgaaattgaagatcaattagacgatgccggcggcttt
gcttacttaggcgaaattgccaaaaatacccctagtgccggtaatattttatcttacgca
gacattgtgcgagaacgtgccgtagtacgtgacatgattgccgttgcccacgaaattgct
gatgcgggttataacccagaaggccgtgattcaagtgcattattagatttggctgaaacc
aaagtctttaaaatcgcagaaatgcgtaccaatgctaatgaaggcccggaaaacattaaa
agcattcttgaaaaaaccgttgataggattgagcaactttataacaatcctcataacggt
gttacaggtgtttcaagtggttttaatgatttagataaaatgaccgcaggctttcagtct
ggcgacttaattattgttgccgcgcgtccttctatggggaaaaccaccttcgcgatgaac
ttgtgtgaacaagccgccatgaatgaagacaagccagtgcttattttcagtctcgagatg
ccgtcagaacagattatgatgcgtatgttggcctcacttggccgagtagaccaaaccaaa
attcgtactggtcagctagacgatgaagattgggcgcgtgtgtcttcaaccatgggtatt
atgcttgaacaaggtaaaatgtacatcgatgatggctcagggttaaccccaaccgaagtg
cgtagtcgtgccagacgtattgcgcgtgagcatggcgggttatcaatgatcatgatcgat
tatctgcaattaatgcaagtgccgtcgttaaaagataatcgtaccttagaaatttcagaa
atctctcgttcattaaaagccttagccaaagaattagaagtacctgttattgcactgtca
cagcttaaccgctcgctagagcagcgagccgataaacgcccaattaactctgacttgcgt
gaatcgggtgcgattgagcaggatgccgatttgattatgttcatttatcgcgacgaagtg
tataacgacagctctgaagataaaggcaccgcagaaatcatcattggtaaacagcgtaac
ggacctattggacgtattcgcttggtattccaaggtcaattctctcgctttgataattat
gctgggccgcaatttgaagaagattaa
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