Shewanella frigidimarina: Sfri_3362
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Entry
Sfri_3362 CDS
T00395
Name
(GenBank) peptidase Do. Serine peptidase. MEROPS family S01B
KO
K04772
serine protease DegQ [EC:3.4.21.-]
Organism
sfr
Shewanella frigidimarina
Brite
KEGG Orthology (KO) [BR:
sfr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sfr01002
]
Sfri_3362
Peptidases and inhibitors [BR:
sfr01002
]
Serine peptidases
Family S1: chymotrypsin family
Sfri_3362
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Trypsin_2
PDZ_2
PDZ
PDZ_6
Trypsin
DUF6288
PDZ_Tricorn
GRASP55_65
Peptidase_S46
Motif
Other DBs
NCBI-ProteinID:
ABI73198
UniProt:
Q07XR6
LinkDB
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Position
4010976..4012325
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AA seq
449 aa
AA seq
DB search
MKTKLSLLSAALLTASLAMTPALSFAAIPQAVDGQAIPSLAPMLERTTPAVVSVAVSGTQ
VSKQRVPDVFRYFFGPNAPQEQVQERPFRGLGSGVIIDADKGYIITNNHVINGADDIQIG
LHDGREVKAKLIGADKESDIALLQIEAKNLIAIKQTDSDEIRVGDFAVAIGNPFGLGQTV
TSGIVSALGRSGLGIEMLENFIQTDAAINSGNSGGALVNLKGELIGINTAIVAPNGGNVG
IGFAIPANMVNNLVEQIIEHGEVRRGVLGVSGRDLDNELAKAFGLDTQHGGFVNEVMPKS
AADKAGLKAGDIITSLNGRSIKTFQELRAKVATMGAGAEVEFGIIRDGDKKTIKTTLGEA
DKVEAEAGNVHPMLQGATLEDSKKGIQITEIAQGSPAAMSGLQKGDLIVGLNRNKVTSLK
ALKEMLKDNQNSVALKILRDNNLLYLVLR
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaccaaattaagcttactttctgctgcgttattaactgcatcgttagccatgaca
cccgcgctatcattcgctgcaattccacaagccgtcgacgggcaagccattcctagctta
gcgccaatgttagaacggacaacgccagcggttgtgtcggtagcagtatcgggcacccaa
gtttcaaaacaacgagtaccggatgtgtttcgctacttctttggtcctaatgcaccacaa
gaacaagttcaagaacgcccttttagaggtttaggttcaggcgttattattgatgcagac
aaaggctacatcattaccaataaccatgtaatcaatggtgcagacgatatccaaattggt
ttacatgatggccgtgaagttaaagcaaaactaatcggtgcagataaagaatctgatatt
gccctacttcaaattgaagcaaaaaacttaattgctattaaacaaactgattctgatgaa
attcgcgtcggtgattttgcagtggccattggtaacccatttggtcttggacaaaccgtc
acgtcagggatagtcagcgcgctaggccgcagtggtttaggcattgaaatgctcgaaaac
tttatccaaaccgatgcagctataaatagtggtaactcgggcggtgcattagttaactta
aaaggtgaactcatcggaattaataccgccattgtcgcccctaatggtggtaacgtcggt
attggtttcgcaatccctgccaatatggtgaataaccttgtagagcaaattattgaacac
ggtgaagtaagacgtggcgtgctcggagtatcaggacgagaccttgataatgaactcgct
aaagcgtttggtttagacactcaacatggtggctttgtgaatgaagtcatgccaaagagc
gcagctgacaaagccggactaaaagcgggtgatattattaccagcctgaatggccgtagc
attaaaaccttccaagaacttcgtgcaaaagttgccactatgggcgcaggtgctgaagta
gaatttgggattattcgtgacggtgataaaaagaccattaaaacaactttaggtgaagcg
gataaagtcgaagcagaagcgggtaacgtacaccctatgttacaaggcgcaaccttagaa
gacagcaagaaaggcatccagatcactgagattgctcaaggctcgccagctgcaatgagt
ggtttacagaaaggcgacttaatagtgggacttaatcgcaacaaagtgaccagccttaaa
gcattaaaagaaatgctgaaagacaatcaaaactctgtcgcgctaaaaatattacgtgat
aacaacttgctatatcttgttttacgctag
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