Shewanella frigidimarina: Sfri_3405
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Entry
Sfri_3405 CDS
T00395
Name
(GenBank) ornithine decarboxylase
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
sfr
Shewanella frigidimarina
Pathway
sfr00330
Arginine and proline metabolism
sfr00480
Glutathione metabolism
sfr01100
Metabolic pathways
sfr01110
Biosynthesis of secondary metabolites
sfr04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
sfr00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
Sfri_3405
09106 Metabolism of other amino acids
00480 Glutathione metabolism
Sfri_3405
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
Sfri_3405
Enzymes [BR:
sfr01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
Sfri_3405
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Ortholog
Paralog
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
ConA_3rd_BAM2
Motif
Other DBs
NCBI-ProteinID:
ABI73241
UniProt:
Q07XM3
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Position
complement(4053784..4054959)
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AA seq
391 aa
AA seq
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MSQFQSIDVADYYDKDTFDRIEAFAKDKPTPFVVIDTQIVAKQYDDMVNNFPFANIYYAV
KANPAKEILTLLRDKGSNFDIASIYELEMVTSIGVSADRISYGNTIKKRVDVRSFFEQGV
RMFASDSEADLRMIAEEAPGSKVYLRILTEGTHTADWPLSRKFGCQNEMAYDLLVLAKEL
GLQPHGISFHVGSQQRDIGAWDSAIGKVKSIYDRLKEEHGIVLKMINLGGGFPANYMDKT
NELGVYAQQIKHFLEEDFGDELPEIILEPGRSLLSNAGVLVSEVVLISRKSNTALERWVF
TDVGKFSGLIETMDEAIKFPIYTERKGELDKCVIAGPTCDSADIMYEHYSYGLPVDLAIG
DRMYWLTAGAYTTTYSAVCFNGFPPLKDYYL
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgagccaatttcaatcgattgatgttgcagattattatgacaaggacacgtttgaccgc
attgaggcatttgctaaagataagccaacgccatttgtagttattgacacccaaatcgtt
gcgaaacaatacgatgatatggttaacaattttcctttcgcaaatatttattatgcggtt
aaggcaaatccggccaaagaaattttaaccttgttgcgagataaaggttcaaactttgac
atcgcatccatttacgaacttgaaatggtaacgtcgataggtgtttctgcagaccgtatt
agctacggtaacaccattaagaagcgtgtcgatgtacgatcattctttgaacaaggcgta
cgtatgtttgcttcagactctgaagccgatttacgcatgattgctgaagaagctcctggt
tcaaaagtgtacttgcgtattttaactgaaggtacacacacagctgactggcctttgtca
cgtaagtttggttgccaaaatgaaatggcgtacgacttattagtattggcaaaagagtta
ggcttgcaaccgcatggcatttcttttcacgtgggttcgcaacaacgtgatatcggtgct
tgggattctgctatcggtaaagtgaaaagtatttacgaccgtttaaaagaagaacacggc
atcgtactaaagatgatcaatttagggggtggttttcctgccaactatatggacaaaacg
aacgagctaggtgtttatgctcagcagattaagcatttcctagaagaagactttggtgat
gaattaccagagattattctagagcctggtcgttctttgctttcaaatgctggtgtatta
gtatctgaagtggtattgatttctcgtaagtcgaacactgcattagagcgctgggtattt
acagatgtgggtaagttctctggtttaattgaaaccatggacgaagcgattaaattccca
atctatactgagcgtaaaggcgagttagacaagtgtgtcattgccggtccaacctgtgac
agtgcagatattatgtatgagcactatagctatggtttaccggttgatttagccattggt
gaccgcatgtactggttaaccgctggtgcttacaccacgacctattcagcagtatgtttt
aacggcttcccaccacttaaagattattacctttaa
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