Shewanella frigidimarina: Sfri_3571
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Entry
Sfri_3571 CDS
T00395
Name
(GenBank) CMP/dCMP deaminase, zinc-binding
KO
K01493
dCMP deaminase [EC:
3.5.4.12
]
Organism
sfr
Shewanella frigidimarina
Pathway
sfr00240
Pyrimidine metabolism
sfr01100
Metabolic pathways
sfr01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
sfr00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
Sfri_3571
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
sfr02044
]
Sfri_3571
Enzymes [BR:
sfr01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.12 dCMP deaminase
Sfri_3571
Secretion system [BR:
sfr02044
]
Type II secretion system
Competence-related DNA transformation transporter (DNA-T) core components
Sfri_3571
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dCMP_cyt_deam_1
MafB19-deam
Bd3614-deam
APOBEC3
SNAD4
APOBEC_N
HVO_2753_ZBP
APOBEC2
Motif
Other DBs
NCBI-ProteinID:
ABI73398
UniProt:
Q07X66
LinkDB
All DBs
Position
4242503..4242937
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AA seq
144 aa
AA seq
DB search
MMTKWATRFLQMAELVASWSKDPSTRVGAVITENNRIVSLGFNGYPHGISDSAETDNREM
KLLKTLHAEENAILHAKRDLSSCEIWVTHFPCPNCAAKIIQTGLRAVHSPKPNEDFLSRW
GDKIKVSQDMFEQAGVQVDWMQVD
NT seq
435 nt
NT seq
+upstream
nt +downstream
nt
atgatgacaaaatgggcgacacgctttttacaaatggccgagctcgtagcatcttggagt
aaagatccctccacccgagttggtgcagtgatcactgaaaacaatcgcatcgtctcgcta
ggttttaatggttatcctcacggaatatcagatagtgctgaaaccgataaccgtgaaatg
aaactgctaaaaacgctccatgcagaagaaaatgccattctgcatgccaaacgagatctc
agtagctgtgaaatttgggtgacccactttccttgcccaaactgcgccgccaagattatc
caaactggattgcgcgccgtacatagcccaaagcccaacgaagatttcctgtcgcgttgg
ggggataagattaaagtcagccaagatatgtttgagcaagctggcgttcaagtcgattgg
atgcaagtagattaa
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