KEGG   Shewanella frigidimarina: Sfri_3748
Entry
Sfri_3748         CDS       T00395                                 
Name
(GenBank) type II secretion system protein E
  KO
K12276  MSHA biogenesis protein MshE
Organism
sfr  Shewanella frigidimarina
Brite
KEGG Orthology (KO) [BR:sfr00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:sfr02044]
    Sfri_3748
Secretion system [BR:sfr02044]
 Type II secretion system
  MSHA pilus biogenesis protein
   Sfri_3748
SSDB
Motif
Pfam: T2SSE MshEN nSTAND_NTPase5 AAA_22 ResIII AAA_16 nSTAND3 AAA_18 AAA_19 AAA_11 AAA_29 AAA_30 NTPase_1 Rad17 ATPase_2 AAA_23 ABC_tran AAA_7 AAA_14 cobW Zeta_toxin DUF87 AAA TsaE
Other DBs
NCBI-ProteinID: ABI73575
UniProt: Q07WN9
LinkDB
Position
complement(4454500..4456260)
AA seq 586 aa
MKPKLKMRLGDLLVQELIITDTQLQQALAEQRNSGKKLGRTLIDLKSITEDQLLKFLSQQ
LNLPYLDISRRPIAAEVVNILPEVQARRYRALVVESNSDHVLVAMSDPADLQAIDNIEVL
VAPKQLMIAVAPEQQLLDAFDNLYRRTGQIAEIAGKLDEEYAADDMFDLANLTQSDSDNE
TTVVKLLQSIFEDAVQMRASDIHIEPGEKVLRIRQRIDGQLHENLLSEVNIASALVLRLK
LMAGLDISEKRMPQDGRFHMEIKGHKIDVRMSTMPIYHGESVVMRLLDQTTGLRTLDETG
MPPHIVARIRKQIKRPHGMLLVTGPTGSGKTTTLYGILSELNTADRKIITVEDPVEYQLP
RINQVQVNHKIGLDFSNVLRTTLRQDPDIIMVGEMRDQETVEIGLRGALTGHFVLSTLHT
NDAVTSALRLLDMGAASYLVASALRVIIAQRLVRRVCHNCAVDYQPTAAERSWLVSVTKR
DISSATFKVGSGCQTCNGSGYRGRIGIFEILELDENMIDAMRTGNPQDFARAALRSPNFI
PLAHSAMEYLFLGTTTLEEVSKLVEDVSESKVPLSKDIVSQQDIGL
NT seq 1761 nt   +upstreamnt  +downstreamnt
atgaagcctaagttaaagatgcggttaggagatcttcttgttcaagagctgattattact
gacacccaattacagcaagcattggcggaacagcgcaattcaggtaaaaagctcggccgc
accttaattgatttgaagagtattacagaagaccagttacttaagtttttatctcaacaa
cttaatttaccgtacctcgatattagtcgtcgtccgatagccgctgaagtggtgaatata
ctccccgaagtacaagcgaggcgctatcgagcattagtggtggaaagtaattccgaccat
gtgttagttgctatgagcgaccctgccgatttgcaggctatcgataatattgaagtgtta
gttgcccctaaacagttgatgattgcggtggcgccagagcaacaattactcgatgcgttt
gataacctttatcgccgtactgggcaaatcgctgagattgccggcaagcttgatgaagaa
tatgccgcagatgacatgttcgatttggctaatttgactcaaagcgacagtgataatgaa
accacggtggtgaagttattgcagtcaatttttgaagatgcggtgcaaatgcgtgcgtca
gatattcacattgaacctggtgagaaagtgctgcggatccgtcagcgtattgatggccaa
ttacatgaaaacctcctcagtgaagttaatattgcttctgctttagtgttacgacttaag
ttaatggcaggactggatatttcagaaaaacgtatgccacaagatggccgttttcatatg
gaaataaaaggtcataaaatcgacgtgcgaatgtcgaccatgccgatttatcatggtgag
tctgtggtgatgcgtttattggatcaaaccacaggtttacgtacgttagatgaaaccggt
atgccaccgcatattgtggcacgtattcgtaaacagattaaacgccctcacggtatgttg
ttagtcacagggccaacaggtagtggtaaaacgactaccctgtacggtattttaagtgag
cttaacactgccgatagaaagattatcactgtagaagatccggttgagtatcaattaccg
cgaattaaccaagtgcaagtcaatcacaagattggtttagacttttctaacgtattgcgt
acaacacttcgtcaagatcccgacattatcatggtgggagagatgcgtgaccaagagacc
gtggaaattggcttacgaggtgcgttgacgggtcactttgtattatcgactttgcacact
aatgatgcggttaccagtgcgttgcgattacttgatatgggtgcggcaagttatttggtc
gctagtgcgctgcgggtcattatcgctcaacgtcttgttaggcgcgtttgccacaattgt
gccgtggattatcaaccaacagcagctgaacgcagttggcttgtaagtgtgacgaaaaga
gatattagcagcgccacctttaaagtggggagtggttgtcaaacctgtaatggttctggt
tatcgcggtcgaattggtattttcgaaatacttgaacttgacgaaaatatgatagatgcc
atgcgaacaggtaatccgcaagattttgcccgtgcagcactgcgcagtcctaactttatt
cccctcgcgcattctgcgatggagtatctattccttggcacgacaacactcgaagaagtg
tcaaaactggttgaagatgtcagtgaatcaaaagtgcctttatcgaaagatatcgttagc
caacaagatattgggttataa

DBGET integrated database retrieval system