KEGG   Shewanella frigidimarina: Sfri_3749
Entry
Sfri_3749         CDS       T00395                                 
Name
(GenBank) TPR repeat-containing protein
  KO
K12284  MSHA biogenesis protein MshN
Organism
sfr  Shewanella frigidimarina
Brite
KEGG Orthology (KO) [BR:sfr00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:sfr02044]
    Sfri_3749
Secretion system [BR:sfr02044]
 Type II secretion system
  MSHA pilus biogenesis protein
   Sfri_3749
SSDB
Motif
Pfam: TPR_16 TPR_2 TPR_1 TPR_14 TPR_19 TPR_Slam ARM_TT21_C ANAPC3 DUF6278
Other DBs
NCBI-ProteinID: ABI73576
UniProt: Q07WN8
LinkDB
Position
complement(4456257..4457534)
AA seq 425 aa
MLKDLEQHQQPGTDKPPVQPAGEFVRPQIQYQSVAKSRSPLISLIVVAVLLIPTLWFGVS
MYRQANIQMANQPTDSNASVTEDTQSSLASQPQGNGVAVDHKSTQISTEVLTQAPAQTLN
QVPIQASTPEITAEVIEPTDRISELELSEVSTASVVNNETVNTQAVLASTVDAEKPNISV
DHNSQNMASLLNTELTQDQITAQTSRFLPAEVPAKIPAAAKTVDMSVNEVVLSKTQMAQL
QYRKAMDAEQAQRLDDAAGYYLEAIILQPSLHKARKQLVEIYFAQNNPTTAMRLLESGIS
MFPQQWEFYVILSQIQTAIKAYDEALITVAMIPDSSSWARDKWIAQTDLAQNSKNFALAE
EAYRNLLVSESTQSRWWMGLGYALDSQQKYPQAAQAYRSALSYEGLSTSAMTFIEQRLDQ
LGENR
NT seq 1278 nt   +upstreamnt  +downstreamnt
atgttgaaagatttagagcagcatcagcaacccggaacagacaaaccaccggtgcaaccc
gcgggtgaatttgtgcgacctcaaattcagtatcaatccgttgctaaatctcgctcacca
ttgattagccttattgttgttgccgtactattgatccctacattgtggtttggtgtatct
atgtaccgccaagccaatattcaaatggccaatcagccaacagatagcaatgcatcggtt
accgaagatactcagtcatcgctggcaagtcagccacaaggtaatggtgttgctgttgat
cataagtctactcaaatctcaactgaagtactaacccaagcaccagctcaaacgctaaat
caagtacctattcaagcgagcacgccagaaatcactgctgaggttattgaaccaacggat
cgcatatctgagcttgaactatccgaagtgagcactgcatcagtcgttaataacgaaacc
gtcaacacacaagcagtactagcttcaaccgtagacgcagagaagcccaatatttcggta
gatcataattcacagaatatggcttcactgctgaatactgaactcactcaagatcaaatc
acagcgcaaacatctcgcttcttacccgcagaagtacccgcaaaaatccctgctgcagca
aaaactgttgatatgagcgttaacgaagtggtgctttccaaaacgcaaatggcgcagctg
caatatcgcaaagcgatggatgctgagcaagcgcaacgtctggacgatgcggcgggttac
tatttagaagccattattttacaaccgagtttacataaagctcgtaagcaattagtcgaa
atttattttgcgcaaaataatccaacaactgcgatgagattactcgagagtgggatcagt
atgtttccgcaacagtgggagttttatgtgattttgtcgcaaattcaaaccgcaattaaa
gcttatgatgaagccttaataacggtggcgatgatcccagatagctcatcgtgggctcgt
gataagtggatcgcacaaacggatttggcacaaaactctaaaaactttgctttagctgag
gaagcttaccgaaacttattggtatctgagtcgactcaatctcgctggtggatggggcta
ggttatgcgctcgattcacaacaaaaatatccacaagccgcgcaagcttaccgatcggca
ttaagctatgaagggttatcaacttcagccatgacatttattgaacaacgtttagatcag
ctaggagaaaaccgatga

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