Shewanella frigidimarina: Sfri_3778
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Entry
Sfri_3778 CDS
T00395
Name
(GenBank) transcriptional regulator, GntR family
KO
K05799
GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
Organism
sfr
Shewanella frigidimarina
Brite
KEGG Orthology (KO) [BR:
sfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfr03000
]
Sfri_3778
Transcription factors [BR:
sfr03000
]
Prokaryotic type
Helix-turn-helix
GntR family
Sfri_3778
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GntR
FCD
MarR
MarR_2
TrmB
HTH_DeoR
HTH_41
HTH_11
HTH_24
Fe_dep_repress
DSX_dimer
HTH_36
Motif
Other DBs
NCBI-ProteinID:
ABI73605
UniProt:
Q07WK9
LinkDB
All DBs
Position
complement(4498584..4499336)
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AA seq
250 aa
AA seq
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MAYIKINQPKISDVIMEQLERMILEGSLQPGQKLPPERELAVQFEVSRPSLREAIQKLEA
KGLLMRRQGGGTYVKEQLWQSLADPIVELMHNDSESQYDLLEFRHATEGMMAYYAALRGT
DADMQNIQKRIIEVEAATNIEAKAAAIVRFYRAVAEASHNVAMLHLVLSLTPVLHKNVAQ
NLELLSIREEASTMANDHRRALLAAIIRRDPDAAREASNEHLSYIEEVMLSVREEDSRLQ
RSLRRLKSGV
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atggcttatattaagattaaccagccaaaaatttctgatgtgatcatggagcaattggag
cggatgatccttgaaggcagtttgcagcctggtcagaaactacctcctgaacgcgaactc
gcggtacaatttgaagtgtctcgtccttcattacgtgaagcgattcaaaaattagaagct
aaagggttgctcatgcgtcgtcaaggcggtggcacctatgttaaagaacaactgtggcaa
agtcttgccgatcctatcgttgaattaatgcataacgactcagaaagtcagtatgactta
ctcgaattccgtcacgccacagaaggcatgatggcgtattatgctgcgctgcgcggcacc
gatgcggatatgcagaatattcaaaaacgaattattgaagtagaagctgcgacgaatatt
gaggccaaagctgctgccattgtacgtttttatcgtgcggttgctgaggcgtcacacaat
gttgctatgttgcatttagtattaagtttaacccctgtgctgcacaaaaatgtcgcacaa
aatttggagcttttaagcatacgcgaagaagcttccaccatggcaaatgatcacagacgc
gcgttactggctgcgattatacgccgggacccagacgctgcacgtgaagcttcgaatgag
catttaagctacatcgaagaagtcatgttgtcagtaagagaagaagacagtcggttgcaa
cgtagtttgcgccgtttaaagagcggcgtgtaa
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