Shewanella frigidimarina: Sfri_3783
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Entry
Sfri_3783 CDS
T00395
Name
(GenBank) type IV-A pilus assembly ATPase PilB
KO
K02652
type IV pilus assembly protein PilB
Organism
sfr
Shewanella frigidimarina
Brite
KEGG Orthology (KO) [BR:
sfr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
sfr02044
]
Sfri_3783
02035 Bacterial motility proteins [BR:
sfr02035
]
Sfri_3783
Secretion system [BR:
sfr02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
Sfri_3783
Bacterial motility proteins [BR:
sfr02035
]
Pilus system
Pilus assembly proteins
Sfri_3783
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T2SSE
MshEN
AAA_30
AAA_22
AAA_16
AAA_14
AAA_29
AAA_7
Motif
Other DBs
NCBI-ProteinID:
ABI73610
UniProt:
Q07WK4
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All DBs
Position
4504003..4505709
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AA seq
568 aa
AA seq
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MSSAAVHLGLSTLFIRKGLLNEEQISTSISESRKHKQSLVTTLVNSKFLSAREIAELCYE
EYGTPLLDLNEFDVTGIADELLNKKLIEKHKCLPLFKRGNRLYIATSDPTNIAALEDFQF
SLGLHAEAILVEDDKLLKALEKIIEDDISGLDLAGADEEALANMEVADTERRDEPSGDSS
DDAPIVIYINKILTDAIRKGASDLHFEPYEKRYRIRFRIDGILHEVSEPPVNLSNRISAR
LKVMSKLDIAERRVPQDGRIKMKLSRTKSIDFRVSSLPTIWGEKIVMRILDSSSAQLGIE
KLGYEDDQRLLYEEMLAKPQGMILVTGPTGSGKTVSLYTGLNILNTEERNISTAEDPVEI
NLEGVNQVHINLKAGLTFASALRSFLRQDPDVVMVGEIRDLETAEIAIKAAQTGHLVLST
LHTNSAAETLTRLINMGVPGYNIASSVNLIIAQRLARRLCPACKHEEEIPVAEMQRLGFS
EANIAKGFTVFKPIGCELCSGGYKGRVGIYEVMKMSDEIARTIMEGGNSLQIATLAKQQG
MRDLRQSGLLKVIHGVTSIAEINRVTSF
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcagctgccgttcatttaggactatcaactttatttatccgtaaaggcctccta
aacgaagagcaaatatcaacttccatttccgaatctcgaaagcacaaacaatccttagtc
acgacattagtaaactccaagttcctttctgctcgcgaaatagctgaactgtgctatgaa
gagtatggcaccccattacttgatttaaatgaatttgatgtaactggtatcgcagatgag
ctactcaataaaaagctcatagagaaacataaatgcttacctctcttcaagcgtggtaat
cgtctttacatcgccacatcagatccaaccaatattgctgctcttgaggattttcaattt
agtctaggtctccatgccgaagctattttggttgaagatgacaaattgctaaaagcgcta
gaaaaaatcatcgaagatgatatctctggtttggacttagctggcgcagatgaagaagcc
ttagccaatatggaagtggctgatacagaaagacgtgacgaaccaagcggagatagcagt
gacgatgcacctattgtaatctatattaataaaattctcaccgatgctattcgtaaaggc
gcctctgatttacattttgagccttacgaaaaacgctatcgtatccgctttcgaattgat
ggtatcttgcatgaagtatctgaaccaccagtcaatctatccaaccgtatttcagcccgc
ttaaaagtgatgtcgaaactcgatattgctgagcgtcgagttccgcaagatggccgcatt
aaaatgaagctgtcgcgcaccaaatcaatcgatttccgtgtcagtagcttgccgaccatt
tggggcgagaagatcgtgatgcgtattttggattcatcttccgctcagttggggattgaa
aagctcggttatgaagatgatcaacgcttattatacgaagaaatgctcgctaaacctcaa
gggatgatattagtcactggccctacgggttcaggtaaaacagtctccttgtatactggc
ctcaatattcttaataccgaagagcgtaatatatctaccgcagaagatccggtcgaaatt
aacctcgaaggcgttaaccaagtacacattaatttaaaagctggcctaactttcgcttca
gcgctacgatcatttttacgtcaagatcctgatgtggtgatggttggtgaaatccgcgat
ttagaaactgcagagatcgccattaaagccgcccaaacgggtcacttagtgttatcaaca
ttacataccaattcagccgccgaaaccttaacccgtttaatcaatatgggtgtgccaggt
tataacattgctagctcagtcaatttaattatagcccaacgacttgccaggcgcctatgc
ccagcatgtaaacatgaagaagaaattcctgttgctgagatgcagcgcttaggcttcagt
gaagctaatatcgccaaaggttttaccgtattcaaaccaattggttgtgagctatgctca
ggtggttataaaggccgagtgggtatatacgaagtgatgaaaatgagcgatgaaatagcg
cgtacaattatggaaggcggtaactcactccaaattgccacccttgccaagcagcaaggt
atgcgcgatttacgtcaatcaggattgctcaaagtcattcacggcgtgactagcatcgcg
gaaattaaccgtgtaaccagcttttaa
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