Shewanella frigidimarina: Sfri_3784
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Entry
Sfri_3784 CDS
T00395
Name
(GenBank) type II secretion system protein
KO
K02653
type IV pilus assembly protein PilC
Organism
sfr
Shewanella frigidimarina
Brite
KEGG Orthology (KO) [BR:
sfr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
sfr02044
]
Sfri_3784
02035 Bacterial motility proteins [BR:
sfr02035
]
Sfri_3784
Secretion system [BR:
sfr02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
Sfri_3784
Bacterial motility proteins [BR:
sfr02035
]
Pilus system
Pilus assembly proteins
Sfri_3784
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T2SSF
Phage_holin_3_6
Motif
Other DBs
NCBI-ProteinID:
ABI73611
UniProt:
Q07WK3
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All DBs
Position
4505817..4507076
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AA seq
419 aa
AA seq
DB search
MATITAKKKPKAKKKTKHQPKVFTYQWKGVNRDGQRTSGELKGSTIAEIRSVLKAQGVTP
KGVRKKSAPLWKTEKSITAMDIAMITRQIATMLAAGVPLVTTIELLGRGHEKAKVRELLG
TILSDVQSGIPLSDALRPHRRYFDDLYVDLVAAGEHSGSLDAVFDRIATYREKAEQLKSK
IKKAMFYPAAVVVVAIAVTSLLLLFVVPQFEDIFNGFGAELPAFTQMIIGISRWLQSSWY
FFVIAIVIGIWLFRRTHRNSQSFRDRIDQMVLKIPVIGDILHKASMSRFARTLSTTFAAG
VPLIDGLESAAGASGNYVYRKALLKVRQEVMSGMQMNVAMRTTGLFPDMLIQMVMIGEES
GGLDEMLNKVANIYEMQVDDAVDGLSSLIEPIMMVVIGTLVGGLIVGMYLPIFEMGNVV
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atggccacaataacagcaaagaaaaagccaaaggcgaaaaaaaaaaccaaacaccaacct
aaggtttttacttaccaatggaagggtgttaatcgtgatggtcaacgtacttctggtgag
ttgaaaggatccacgattgctgaaatccgtagtgtgttaaaagcacaaggtgtcacccct
aaaggggtgcgtaaaaagtcggcgcctttatggaaaacagaaaaaagtattaccgcaatg
gatattgcgatgattacccgccaaatagctaccatgcttgctgctggtgtcccattagtc
acaactattgaacttcttggccgtggccatgaaaaagctaaagtccgagaattactgggt
actattttatccgatgtccaatcaggtattccactttcagatgcactaagacctcaccga
cgatattttgatgatttatatgtcgatttagtcgctgctggcgaacattctggctcactc
gatgccgtgtttgatcgtatcgcaacttatcgtgaaaaagctgaacaattaaaatctaaa
attaaaaaagcgatgttctatcctgctgctgtcgtagttgtagcaattgctgttacgtcg
ttattgttgctttttgttgtgccccaatttgaagatatatttaatggcttcggtgcagaa
ttaccggcatttactcaaatgattattggtatctcgcgctggttacaaagctcatggtac
ttctttgtaatagctattgttatcgggatctggctttttagacgaactcatcgtaattct
caaagttttcgcgaccgaattgaccaaatggtactgaagatacccgtgattggtgacatt
cttcacaaagcgtctatgtcgcgttttgctcgaaccttatcaacaacctttgctgcaggc
gtaccattaattgatggtttagagtctgccgcgggtgcttctggtaactatgtgtaccgt
aaagcactattaaaggttcgccaagaagtgatgtcgggtatgcagatgaatgttgccatg
cgcaccactggcttatttccagacatgctgattcaaatggtgatgattggtgaagaatcg
ggtggtttggatgaaatgcttaataaagtggctaacatatacgaaatgcaagttgatgat
gcggttgatggtttatccagtttaatagaacccatcatgatggtagtcattggtactctg
gttggaggccttattgttggtatgtatttgcctattttcgaaatgggtaacgttgtttag
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