Shewanella frigidimarina: Sfri_3806
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Entry
Sfri_3806 CDS
T00395
Name
(GenBank) UDP-N-acetylmuramoylalanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
sfr
Shewanella frigidimarina
Pathway
sfr00470
D-Amino acid metabolism
sfr00550
Peptidoglycan biosynthesis
sfr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sfr00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Sfri_3806
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Sfri_3806
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sfr01011
]
Sfri_3806
Enzymes [BR:
sfr01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
Sfri_3806
Peptidoglycan biosynthesis and degradation proteins [BR:
sfr01011
]
Precursor biosynthesis
Amino acid ligase
Sfri_3806
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Gene cluster
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Motif
Pfam:
MurD-like_N
Mur_ligase_M
Mur_ligase_C
KR
NAD_binding_8
DAO
Motif
Other DBs
NCBI-ProteinID:
ABI73631
UniProt:
Q07WI3
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All DBs
Position
complement(4538608..4539930)
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AA seq
440 aa
AA seq
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MQTQYTHIVLGLGATGLSVVRFLATKGIKPLVMDSRRHPPGADTLAQEFADIELLAGGFD
CRYLVQASQIIISPGVPIDTPEVRAALDMGIEVIGDVELFAREIADKKPCVVGITGSNGK
STVTTLVYEMLLAAGKSVAIGGNIGTPALDLLPQNADFYVLELSSFQLETTHSLNCIAAT
CLNVSEDHMDRYSDLNTYREAKLRLYPQSRFVMYNRDDELTYPLEPMNQNNFGLGVPEGD
AWGLSDGKIFHGDSEIINLIDVTLIGSHNHANLLAAMALADACGVGKEAMIEVAKSFVGL
SHRCELIAVKQGVSYINDSKATNVGATVAALEGLNSHLGDLYLIAGGDGKGSDFRPLTEP
LSNITQLITLGRDGRKIAKLKAGTIEVATMAEAVAKAAELASSGDIVLLSPACASLDMYK
NFMARGDDFRQCVESLADGE
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgcaaactcaatatacgcacattgttttaggcttaggggcaacagggctctcggtcgtg
cgttttttagcaactaaaggcattaagcctttagtcatggacagtcgtcgtcatccgcct
ggtgcagatacgctggcacaagagtttgccgatattgaattattggccggtgggtttgat
tgccgttatttagttcaagccagccaaattatcatcagtcctggtgttccaatcgatacg
cctgaagtacgcgctgcgttggacatgggaattgaagtgattggtgatgttgagttattt
gctcgagaaatcgcagacaagaaaccttgcgttgtgggtatcactggatcaaacggtaaa
tctacggtaacgacattagtgtacgaaatgttgttagctgccggaaagtcggtggcgatt
ggcggtaacattggtacaccagcgctggatttattacctcaaaatgcagacttttacgta
cttgagctatcgagttttcaacttgaaaccactcattcattaaattgtattgcggcaacg
tgtctcaatgttagcgaagaccatatggatcgctatagtgacttgaatacttaccgtgaa
gccaaattacgcttatacccacaaagccgctttgtgatgtacaaccgtgacgacgaatta
acttatccgctagagccaatgaatcaaaataattttggtttgggcgtgccagaaggtgat
gcatggggattaagtgatggcaagattttccatggtgacagtgaaattattaatttaatt
gatgtgaccttaattggtagccataaccatgcaaacttattagccgcaatggcattagcc
gatgcttgtggtgtgggtaaagaagccatgattgaagtggctaaatcctttgttggctta
agtcatcgttgcgaattgattgccgttaagcaaggtgtgtcgtatatcaatgactctaaa
gcaaccaatgtcggcgcgacagttgccgcactagaggggcttaattctcatttaggtgat
ttgtacttgatcgccggtggcgatggtaaaggcagtgattttcgtccactaacagaaccg
ttgagtaatattacccagcttattaccttagggcgagatggccgaaaaattgccaaatta
aaagcaggcactattgaagtggcaacgatggctgaagccgtcgccaaagccgctgaatta
gcatcgtctggtgacatcgttttattgtcgccagcatgtgccagtttagatatgtataaa
aactttatggctcgcggtgatgattttagacagtgtgtggagtcgttagccgatggcgaa
taa
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