Shewanella frigidimarina: Sfri_3853
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Entry
Sfri_3853 CDS
T00395
Name
(GenBank) transcriptional regulator, AraC family
KO
K25495
AraC family transcriptional regulator, regulator of nimT
Organism
sfr
Shewanella frigidimarina
Brite
KEGG Orthology (KO) [BR:
sfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfr03000
]
Sfri_3853
Transcription factors [BR:
sfr03000
]
Prokaryotic type
Helix-turn-helix
AraC family
Sfri_3853
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
AraC_binding
Cupin_2
MukF_C
DUF5395
Motif
Other DBs
NCBI-ProteinID:
ABI73678
UniProt:
Q07WD6
LinkDB
All DBs
Position
complement(4602762..4603550)
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AA seq
262 aa
AA seq
DB search
MFDAIGWDEIKNFEYMKQSIIAKIEHACASHEIPLHTHPKGQLILALHGYVTCEVSAKMW
MVPTHSAIWIPAYKVHSNRASDNAKLCHLFIDSNMDGMPQNTCTLAISPLVKELMCELAS
RDQHYRSNSKTARLAQVLHDQLIDMPIQHLDFVLSKNMVIQAMSQQLISQPHDRKTLPQW
AEQFALTERTLARLIKKETGMTFGKWRTQLHIITSLQALSDKQSVQQVSELLGYESVSAF
ITMFKKVMKTSPMKYMNELNAY
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atgtttgatgcaattggttgggatgaaatcaaaaattttgagtatatgaagcaatccatt
attgccaaaatagagcatgcctgtgccagccacgaaattccgctgcatactcacccaaaa
ggtcagttaatcttagcattgcatggttatgtgacttgcgaggtatcggcaaaaatgtgg
atggtaccaacccatagcgctatttggatccctgcgtacaaagtccacagtaaccgcgca
tcagataacgccaagttgtgccatttatttatcgatagcaatatggacggcatgccacaa
aatacttgtacattagctatttcgccattagtgaaagagctgatgtgtgaacttgctagt
cgcgatcaacattatcgctcaaacagtaaaacggcacgattagctcaggtattacacgac
caattaattgatatgccgatccagcatttagattttgttctgtctaaaaacatggttatt
caagcgatgagccagcaattgataagtcagcctcacgacagaaaaacactgccgcaatgg
gctgaacaatttgccttaacagagcgcacattagcgcggttgattaagaaagaaaccgga
atgacttttggcaaatggcgtacacagttgcatattattacgtcactgcaagcactgtca
gataagcaaagtgtgcaacaagtatcagagttattaggctatgagtcggtaagtgcgttt
attaccatgtttaaaaaagtcatgaaaacatcaccgatgaaatacatgaacgagttaaat
gcatactga
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