Shewanella frigidimarina: Sfri_3865
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Entry
Sfri_3865 CDS
T00395
Name
(GenBank) transcriptional regulator
KO
K19736
TetR/AcrR family transcriptional regulator, regulator of autoinduction and epiphytic fitness
Organism
sfr
Shewanella frigidimarina
Brite
KEGG Orthology (KO) [BR:
sfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfr03000
]
Sfri_3865
Transcription factors [BR:
sfr03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
Sfri_3865
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TetR_C_7
TetR_N
HTH_11
HTH_22
HTH_36
HAD_2
Motif
Other DBs
NCBI-ProteinID:
ABI73690
UniProt:
Q07WC4
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All DBs
Position
4618037..4618654
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AA seq
205 aa
AA seq
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MKPMNTEKQTRSQIKRAAIIEAARTTFKELGVAATSMDKLAEVAGVSKRTVYNHFATKEA
LVMTLMTDLWQQALSQPSVIYSSHQPLAEQLQQLVRFDMDYIQSEEHIEVSRMVIGHLFY
TTEMQEELQKVIKEETAILRWIKAATLDGRLTVTNVEQAQGEVQSLIKGQCFWPLIFQVE
EPLNDQQKDDIAASIVTMFLCRYQA
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccaatgaacacagaaaagcaaacacgcagccagattaaacgtgccgcgattatt
gaagcagccagaacaacctttaaagaattaggggttgcggcaaccagtatggataaatta
gccgaagtagctggagtgtctaagcgcacggtatacaaccactttgccaccaaagaagct
ttggtgatgaccttgatgactgatttatggcaacaagcattatctcaaccctctgtgata
tatagctcacatcaacctttggcagaacaactgcaacagttggtgcgttttgatatggat
tacattcaatcagaagagcacattgaagtatcacgaatggtgattggccatctgttttat
accactgaaatgcaggaagaattgcaaaaggttattaaagaagaaacggctattttgcgc
tggataaaagcagcgacactggacggacgcttaactgtgacgaatgttgaacaggcccaa
ggagaagtacaaagcttgattaaaggccaatgtttttggccattaatatttcaagtcgaa
gagccattaaacgatcaacaaaaagatgacattgccgccagcatagtaaccatgttttta
tgccgttatcaggcataa
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