Shewanella frigidimarina: Sfri_3895
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Entry
Sfri_3895 CDS
T00395
Name
(GenBank) hypothetical protein
KO
K28069
dimethylpropiothetin dethiomethylase [EC:
4.4.1.3
]
Organism
sfr
Shewanella frigidimarina
Pathway
sfr00920
Sulfur metabolism
sfr01100
Metabolic pathways
sfr01120
Microbial metabolism in diverse environments
sfr01320
Sulfur cycle
Brite
KEGG Orthology (KO) [BR:
sfr00001
]
09100 Metabolism
09102 Energy metabolism
00920 Sulfur metabolism
Sfri_3895
Enzymes [BR:
sfr01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.3 dimethylpropiothetin dethiomethylase
Sfri_3895
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Paralog
GFIT
Motif
Pfam:
DMSP_lyase
DUF5046
Motif
Other DBs
NCBI-ProteinID:
ABI73720
UniProt:
Q07W94
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All DBs
Position
complement(4650200..4651453)
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AA seq
417 aa
AA seq
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MDDMKYNTLLVMMLLSSSAMASEIPSFLDKNDVDNAEFTCLGAESQYDKNDQKYVDILWN
ETLQYLQSYAVALTNSENGPCLNSDQAMYDSTEGGKNMCIMDRRDMKLLVKNIYQVINNP
DKAKKCFGARQDVDWIYSPGGQLAEKSPVAKWLKRATFDSFFDTKVTNKDVRKLGKEFTK
NFTKMVTGDEVKMPSAFPTDISANVLPNLWAAAGWYPMYAEESKRNDKNFNNIRGGYAYA
EIFGHWGLLRIDEINGEKVGAEVGMTVQSVDTLYPYHNHAISEIYYNMRVPACANEFKSF
AVREDSPLINTVKEDDKVRQVQFDAGQHNGQTMWLSSSADIDPLMYFHQNTIHAFEVDGS
CEAKPEERAIVSVWARSNANDKRNDYGTTLLCESAKNPGTPAHKDEVIQCDLTKIKW
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atggatgatatgaaatataataccttgttagttatgatgttgttatctagttctgctatg
gcgagtgaaatacctagttttttagataagaacgatgttgataatgctgagttcacttgt
ttaggagcggaatctcagtacgataaaaatgatcaaaaatatgtcgatattttatggaat
gaaacactgcaatatttacaatcttacgcggtagcattaaccaatagtgaaaatggtcca
tgtttaaattcagaccaagcaatgtacgattctaccgaaggtggtaagaatatgtgcatc
atggatcgcagagacatgaagctattagttaaaaacatttatcaagttattaataatcca
gataaagcgaaaaagtgttttggtgcgcgccaagacgtcgattggatttacagccctggt
ggtcaattagctgaaaaatcccccgtagctaaatggcttaaacgtgcaacattcgattcc
ttttttgacacaaaagtcactaataaagacgtgcgtaaactcggcaaagagtttactaaa
aactttactaaaatggtgacgggcgatgaagtgaaaatgccctcagctttcccaacagat
attagtgccaatgtattacctaatttatgggctgcagcaggttggtacccaatgtatgct
gaagaaagtaaacgcaatgataaaaacttcaacaacattcgtggtggttatgcctatgcc
gaaatttttggtcactggggtctattacgcatagacgaaattaatggcgaaaaggttggt
gcagaagtcggtatgacagtgcaatcagtcgataccttatatccctatcataaccatgca
atatctgaaatttattacaacatgcgcgtacctgcgtgtgcgaatgagtttaagagcttt
gccgtgcgtgaagattcaccgttaattaacaccgttaaagaagacgacaaagttagacaa
gttcagtttgatgcaggtcaacacaatgggcagactatgtggctgtcgagcagtgctgat
atcgatccgctaatgtatttccatcaaaatactatccatgcctttgaagtcgatggcagc
tgcgaagctaagccagaagagcgcgctatcgtgtctgtttgggcaagaagtaatgccaac
gacaagcgtaatgactatggcaccacattgctttgtgagtcagctaaaaaccccggtaca
cctgctcataaagatgaagttattcaatgtgacttaacaaaaatcaaatggtaa
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