Shewanella frigidimarina: Sfri_4037
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Entry
Sfri_4037 CDS
T00395
Name
(GenBank) SAM-dependent methyltransferase
KO
K06969
23S rRNA (cytosine1962-C5)-methyltransferase [EC:
2.1.1.191
]
Organism
sfr
Shewanella frigidimarina
Brite
KEGG Orthology (KO) [BR:
sfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sfr03009
]
Sfri_4037
Enzymes [BR:
sfr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.191 23S rRNA (cytosine1962-C5)-methyltransferase
Sfri_4037
Ribosome biogenesis [BR:
sfr03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Sfri_4037
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltrans_SAM
PUA_3
Cons_hypoth95
Methyltransf_31
MTS
PrmA
TRM
Methyltransf_25
TRM5-TYW2_MTfase
Methyltransf_15
Spermine_synth
PUA
Methyltransf_10
Motif
Other DBs
NCBI-ProteinID:
ABI73862
UniProt:
Q07VV2
LinkDB
All DBs
Position
4814835..4816028
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AA seq
397 aa
AA seq
DB search
MAIRIKLKPGRERSLERRHPWIFSNGIHNVNGGKPQAGDTVEVVAHDGHWLGRGAWSPES
QIQVRIWTFDKEETIDADFFARRIKRAQAGRDDLIREQGLTGYRLIAAESDGLPGITIDR
YANVLVCQLLSTGAEKWRDTIVEQLVLQYPDCAVYERSDVDSRKKEGLVPVVGLLHGELP
AMPVIIEENGIKIAVDVVKGHKTGFYLDQRDNRAMAARFVKGKSVLNCFCYTGTFGLYAA
KAGAASIENVDVSTLALQTARDNMAINNLNDDHVNYNEADVFKLLRQYRDEGKTFDVIVL
DPPKFADNKSQLDGACRGYKDINMIAMQLLNPGGILLTFSCSGLMQSDLFQKVVADAALD
AKREVQFIERMHQASDHPISSAFPEGYYLKGLVARVW
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atggctatcagaattaaacttaaacctggccgcgaacgttcgttagagcgtcgccaccct
tggatattttccaatggaattcacaacgtcaatggcggaaaaccgcaagctggtgacact
gttgaagtagtggcgcacgacgggcattggctcggacgcggtgcctggtcgccagaatct
caaatccaagtgcggatatggaccttcgacaaagaagaaactatcgatgccgattttttc
gcccgacgcattaaaagagcccaagcgggtcgtgatgatttgatccgcgaacaaggtcta
acgggctatcgcttaattgccgctgaatcggacggtttacccggtatcaccatagaccgt
tatgccaatgttctggtatgtcagttattgagtactggtgctgaaaagtggcgcgatact
atcgttgagcaactggttcttcaatatccggactgcgcggtctatgagcgttcagatgtt
gactcaagaaagaaagaaggcttagttcctgtagtaggattactgcacggggagttacct
gctatgcccgtgatcatcgaagaaaatggtattaagattgccgtcgatgttgttaaaggt
cataaaacaggtttctatctggatcaacgtgacaaccgtgccatggcagcccgttttgtc
aaaggtaaatcagtgcttaactgcttctgttacaccggtacttttggcttgtatgctgcc
aaagctggcgctgcgagtattgaaaacgtcgatgtatcaaccttagcgctgcaaactgct
cgcgataatatggccattaacaaccttaatgatgaccatgtaaattataacgaagctgac
gtattcaaattactacgccagtaccgagatgaaggtaaaacctttgatgttattgtctta
gacccgcctaaatttgccgacaataagtcacaactcgatggcgcatgtcgcggttataaa
gacatcaatatgattgcgatgcaattacttaatccaggcggaatattactgacgttctcg
tgttcaggcttaatgcagtcagacctattccaaaaagtggttgccgatgctgcacttgat
gccaagcgtgaagtgcaatttattgaacgcatgcaccaagcaagcgaccacccaattagt
agcgcattcccagaaggttattacctcaaaggactcgttgctcgcgtttggtaa
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