KEGG   Stenomitos frigidus: RBJ76_01190
Entry
RBJ76_01190       CDS       T10829                                 
Name
(GenBank) AMP-dependent synthetase/ligase
  KO
K01897  long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
Organism
sfri  Stenomitos frigidus
Pathway
sfri00061  Fatty acid biosynthesis
sfri00071  Fatty acid degradation
sfri01100  Metabolic pathways
sfri01212  Fatty acid metabolism
sfri02024  Quorum sensing
sfri04146  Peroxisome
Module
sfri_M00086  beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:sfri00001]
 09100 Metabolism
  09103 Lipid metabolism
   00061 Fatty acid biosynthesis
    RBJ76_01190
   00071 Fatty acid degradation
    RBJ76_01190
 09140 Cellular Processes
  09141 Transport and catabolism
   04146 Peroxisome
    RBJ76_01190
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    RBJ76_01190
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01004 Lipid biosynthesis proteins [BR:sfri01004]
    RBJ76_01190
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:sfri04147]
    RBJ76_01190
Enzymes [BR:sfri01000]
 6. Ligases
  6.2  Forming carbon-sulfur bonds
   6.2.1  Acid-thiol ligases
    6.2.1.3  long-chain-fatty-acid---CoA ligase
     RBJ76_01190
Lipid biosynthesis proteins [BR:sfri01004]
 Acyl-CoA ligase
  Long/very long chain acyl-CoA ligase
   RBJ76_01190
Exosome [BR:sfri04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   RBJ76_01190
  Exosomal proteins of breast cancer cells
   RBJ76_01190
SSDB
Motif
Pfam: AMP-binding AMP-binding_C_3
Other DBs
NCBI-ProteinID: XHX78581
LinkDB
Position
complement(170291..172516)
AA seq 741 aa
MSCVEKTYAAPPHSGAVVLGRTLPSLLDEACHATPNEHAFHQWTETGWQPLSNQTFRSTA
EAVAVGLLDLGLEKGDRVAFLMHSDLNFCLLDMACLLANLVDVPIDLTQTLEHIIFVLQH
SEAKALIVSNVDLLTQIAPYLSKTPHLQTVIVAEAPSDWQLAPLSCITPPINTATSDRGL
ASSSAIESTCLEIPMMLHSAHVDQLIAAVPPCLQVLVLETVKQQGQAKISVDYLQQLRAA
LTPHDLATIIYIPDERGQMQGVMLSHENLSANAIASFSGIENLKHGEQEIVLSFLPLNHV
LARVMLYGHMHYGHCIYFSNPNRVLKQLKDVRPTVLVTVPLFLEKIYGKIVEKSYRSPPI
TVKETAYCEGIVGKSTWLLFPLVVSLKAHFHLLLALLQSLHVRCKQLLLQGALKLAQRYE
LGQAPKGLYALLLKVADRFVLSKWRAVFGDRLKYLICGGAALNAEIVNAFAAAGMMIFQG
YGLTQASAVVCCNRGHWNRAGTVGVPIAGVEVAIADDHEILVRSPYVMQGYYKHPALTRE
AIDADGWLHTGDLGTFTDDGLLRIIGLKKALFKLSTGKYIAPQPIEERLKRSSLVAHAIV
VGSEQKACAVLLVPNLEALHVQALENGIDGSLDNLLQHPSILALYRAVVNAANCHLPYWA
TVKQFRLINATFSVENGLLTPSGAINRSQAIATFAADIATLYQDNLERRANDRNGISMSI
VSASTSDCPAFAQSLNPRLTT
NT seq 2226 nt   +upstreamnt  +downstreamnt
atgtcatgcgttgaaaaaacttacgcagcgcctccgcactcgggggcggtcgttttaggt
cgaacactgccttctttattggatgaagcatgtcatgctacaccgaatgaacacgcattc
catcaatggacggaaacaggctggcaacctctctcaaatcaaacctttcgatcgactgct
gaagcggtagcagtaggattgttagatttggggctggaaaagggcgatcgtgtggcgttt
ttaatgcacagcgatctcaacttttgcctgcttgatatggcatgtcttttagcaaattta
gtagatgtgccaattgatttaacccaaacgcttgaacacattatttttgttctacagcat
agtgaagcgaaagcactcattgtctcgaatgtggatttgttgacgcaaattgcgccctat
ctcagcaaaactcctcacttacagacagtgattgtggcggaagcaccatccgattggcag
ctagcgccgttgtcttgcataacacctccaattaatactgcgactagcgatcgcggacta
gcgagcagcagtgccattgagtctacttgtttagagattccaatgatgctgcactcggct
cacgtcgatcaactgattgcagcagtcccgccgtgtcttcaagtgctggtgcttgaaacc
gtcaaacagcaagggcaggctaaaatctcggtcgattatttacaacaattgcgtgcggca
ttaacgccccatgaccttgccaccatcatttacattccagatgaaagggggcaaatgcag
ggcgtgatgctcagccacgaaaacctttctgctaatgcgatcgcgtccttttcaggcatt
gaaaacttaaagcatggcgaacaggaaattgtactttcctttttgcccttgaatcatgtg
cttgccagggtcatgctttatggtcacatgcactacggtcattgcatctatttctccaat
ccaaatcgtgtgttgaaacagctcaaggatgtgcgacccactgttttggtcacggtacca
ctctttctggagaaaatttacggcaagattgtcgaaaaaagctatcgatcgccaccaatc
acagtcaaggaaactgcttactgtgagggaattgtcggcaaatccacatggctacttttt
ccactcgttgtgtcactgaaagcccattttcatctcttgttagctttgctgcaatcgtta
cacgttcgatgcaagcagttgttactccagggggcgctgaagctggctcaacgctatgaa
ctagggcaggcaccgaaaggactctatgcgcttttgttaaaggttgccgaccggtttgta
ctctccaagtggcgggcagtgtttggcgatcgcctgaagtatctcatctgtggcggggct
gccctcaacgcagagattgtcaatgcttttgcagccgcgggtatgatgatctttcaaggc
tatggtttgacgcaagccagtgcggtggtttgttgcaatcgtgggcactggaatcgcgct
ggaactgtaggtgtccccattgccggggttgaagtggcgatcgcagacgatcatgaaatt
ctggtacgtagtccgtatgtcatgcagggctactacaagcatcctgctctgacacgggaa
gctattgacgcggacggctggttacatacgggtgacctgggcaccttcactgatgatggc
ttgctcaggattattggtctcaagaaagcattgttcaagctttcaacgggcaagtatatc
gcgccacagccgatcgaagagcgcttgaaacgctcctcattggttgcccacgcgatcgtc
gttggctcggagcaaaaagcctgtgccgtgctgcttgtgccgaatttggaggcgttgcat
gtgcaagccctggagaacggcatcgatgggtcgctggacaacctgttgcagcatccctcc
attctggcgctgtatcgagccgtggtgaatgctgccaattgtcatttgccgtattgggcc
actgtgaaacagtttcggctcatcaacgccaccttctcagtggaaaatgggctgctcaca
ccgagtggagccattaatcgatctcaggcgatcgccacgttcgctgctgacattgcaacc
ctctaccaagacaatttggaacggcgggcaaatgatcgtaatgggatatccatgtcgatc
gtgtctgcttccacttcggattgtcccgcctttgcccaatcgttaaatccacgcttaacc
acctaa

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