Stenomitos frigidus: RBJ76_04225
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Entry
RBJ76_04225 CDS
T10829
Name
(GenBank) PAS domain S-box protein
Organism
sfri Stenomitos frigidus
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
GAF
HATPase_c
PAS_4
PAS
HisKA
PAS_3
PAS_9
GAF_2
PAS_8
Hpt
Receiver_CRE1
PDE8A_N
GAF_3
DUF2378
Motif
Other DBs
NCBI-ProteinID:
XHX79149
LinkDB
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Position
835563..839972
Genome browser
AA seq
1469 aa
AA seq
DB search
MTAVPPMAETKRLEALSRYQILDTAPEEAFDDLTQLAAQICGTPMAMMTLVADDRQWVKS
KVGLSIDTIELDVGFCPLCVERREPLIIVDTAADPQFAKNVVVTDAPYVRFYLAVPLITP
SGYAIGTLCVMDRQPREPQPAVVEALRRLGRQVVSQLELQRNLGALTTAIAARQQVERAL
QRSEERFRSAFDHAAVGMALVGLGGHFFQVNRSICTIFGYSESEMLTKTLQELTHPDDLD
QNLRFFQQALTGDVESYQLEKRYIHKLGHTVWISLTSSLLRDAAGDPLHLVSQLQDITQR
KLTEHALQQSEAHFRDLVQNLPTGIALQGAKAEMLLVNPAALKMLGLEEAQMMGMSSLDD
RWQVVHEDGSPLPGEEHPVPQAIATGKPVHNVVMGVYRPKYNDLAWLLVNADPHFNPDGS
LQHVLCSFNDISDRKQTEETLRKTEARSQALLNAIPDLMLRVNCEGVYLDVKFAKDFETL
LPPAEILGKREADVLPPDVAEKRQHCLEQALATGELQFCEYQLALEDGIHHEEARIAVSG
DDEAVIIVRDVTQRKLAEAELESQNYRAYLLTAITLRIRQSLKLSEILSTTVAEVRQFLQ
VDRVLIYRFEPNWDGTVVVESVDPGWLSMLGAVVQDTCFQDGGWQAYYRGRTQAIDDIEQ
ALLPPCYKDLLAKFQVRANLVVPIIEGRGATGKARLWGLLIAHHCAAPRHWRTLEIDFLT
QLADQVGIALTQAHLLARETQQREQLAQHNLALEQARREAEQASQMKSTFLATVSHEIRT
PMNGVLGMTGLLKETSLNPEQRDFVETIQNSGETLLHLINQILDFSKLEAGEMELDAIDF
NLTLCVEEIADILAPVAHAKRLELATLVYRNLPTQLRGDANRLRQILTNLVGNAIKFTHT
GEVVVQASLLAETATTATVMLSVIDTGIGIAAAGLDRLFKPFSQVDASTTRRYGGTGLGL
AISRQLVELMGGEIGVESTVGKGSRFWVTLTFDRPSSESALPPLAIATPLHRLRLLVVDD
NATNRKILRYQVSAWGMYMDEAENAMAALQALREHASMGIPYDIAVLDMQMPEMDGEMLG
SQIKADLLLASTKLIMMSSLNPGSSSSQILAQGFSAFLVKPVKQSRLMDCILNALMDDPS
PRSSLALAPSDATRFDASCFDEEPPLLAATLERSSEQTTATAHRATVVPATTTPTPPALT
FLLVEDNAVNQRVTLSQLKHLGYTADVATDGEVALQMMTQANYDLVLMDCQMPGLDGYST
TREIRRLEAGQQQQTVIIALTANAMKEDRDQCLAAGMDDYLSKPLQKDILAAKLTHWSQI
LLARKQTAISAPPPILNTSLQPLPTQATLIAQTVNQNALSHIIDWHYLHQLSDDNEAFER
ELLHIFVGDVGNHLAQLKRAIEQRHFHDLEHAAHHIKGASGNVGLAAMSAIASQFEQEAR
HNEIQDAVERVAKLQQTLDAVQLFLATQS
NT seq
4410 nt
NT seq
+upstream
nt +downstream
nt
atgacggcagtgccaccaatggcggaaaccaaacggctagaggctctgtcccggtatcaa
attctggatacagcgcctgaggaagctttcgatgacctgacgcagctagcggctcagatt
tgcggtacaccgatggcaatgatgacgctggtagcggacgatcgccagtgggttaagtca
aaagtggggctgtcgatcgataccatagagcttgacgttggtttttgcccactgtgcgtg
gaacggcgagagcctctcatcattgttgacaccgccgctgacccacagtttgcgaagaac
gtagtggtaaccgatgcgccgtatgtccgcttttatctagctgttcctttaatcacaccg
tcagggtatgcgatcggcaccctttgtgtgatggatcggcagccccgcgaacctcagcca
gcagtcgtagaggcccttcgtcggctgggtcgccaggtcgtcagccaactagaactgcaa
cgaaatcttggtgcactgaccaccgcgatcgcggcacggcagcaggtagagcgcgcactg
caacgtagtgaggaacggtttcggagtgcgtttgaccatgccgcggtcggtatggcgttg
gtcgggttaggggggcacttctttcaggtcaaccgctcgatctgcaccatttttggctac
tccgagtcagaaatgctcaccaaaaccttgcaagagctgacccatcctgatgatcttgac
caaaacctgcgcttttttcagcaagccttaacaggcgacgttgaatcctatcagctagag
aaacgctacatccataagttagggcatacagtatggatctcgctcacatcgtctctgctg
cgagatgccgccggtgaccctctacacctcgtctctcaacttcaggatattactcagcgc
aagctgaccgaacacgcattacagcaaagcgaagcccattttcgtgacctggtgcaaaat
ctgcccaccggcattgccttacagggcgcaaaagcggaaatgttgctggtcaacccagcc
gctctgaaaatgttgggtctggaggaagcccaaatgatgggcatgtcatctctagacgat
cgctggcaagtggtgcatgaagatggctctcccttacctggcgaagaacatcctgtaccg
caagcgatcgcgactggcaaacccgtacataacgtggtcatgggcgtgtaccgtcctaaa
tataacgacctggcttggcttctggtcaacgctgacccacacttcaaccctgatggcagc
ctccagcacgttctttgttccttcaacgatattagcgatcgcaagcaaaccgaagaaacc
ttacggaagaccgaagcgcgtagtcaggcgctgctcaatgccattcccgacttgatgctg
cgtgtcaactgtgaaggcgtttatctcgatgtcaaatttgccaaagactttgagacgctc
ctgccgcctgctgaaattcttggtaaacgtgaagccgatgtgttgccgcccgacgtggct
gagaagcgtcaacactgcctggagcaggcccttgcaacaggcgaactccagttttgtgaa
taccaactggcgttggaggatgggattcaccatgaagaagcccgcattgctgttagcggt
gatgatgaagccgtgattattgtgcgcgatgtcacccaacgcaagctagcagaagcggaa
ctcgaaagccaaaactaccgcgcttatctgctgacagcgattactctccgcattcggcaa
tcgctcaaactgagtgagattctgagtacaacggtcgctgaggtgcgtcaatttctgcaa
gtcgatcgcgttttaatctatcgctttgaaccaaattgggatggcacagtggtcgtagag
tcggtcgatccgggttggttatcaatgctgggagcagtagtgcaagacacttgctttcag
gacggtggctggcaagcctattaccggggcagaacacaggcgatcgacgacatcgaacag
gctctactgcccccatgttacaaagatctgctggctaaatttcaggtgcgagccaatctc
gtcgtgcccattatcgaagggcgtggtgcgactggcaaagctagactttgggggttactc
attgctcatcactgtgccgctcccaggcactggcggacgcttgaaatcgactttttgacc
caactagcagaccaggtgggcattgcgctcacgcaggcgcatctactggcacgcgaaacc
caacagcgcgaacagttggcacaacataatttagcgctagagcaagcccgccgtgaggca
gagcaagcgtctcagatgaaaagtacgtttctggcgactgtcagtcacgaaattcgtacg
ccgatgaatggtgtactgggtatgaccgggctcttaaaggaaaccagcctcaacccagaa
cagcgcgattttgtcgaaacgattcagaacagtggtgaaacgctgctgcacttgatcaat
caaatcctcgatttttccaagctcgaagcgggtgaaatggagctagacgcgatcgacttc
aacctgaccctctgcgtagaagagatagccgacattctggcacccgttgcccatgccaaa
cggctggaactagcaaccctggtttatcgcaacttgccgacgcagcttcgtggtgatgcc
aatcggctacgtcaaattctcaccaatctagtgggcaacgcgatcaagttcacccatact
ggtgaagtggtggtacaggcatcgctccttgcagaaacagccaccacagcgacagtcatg
ctttctgtcatagacacaggcattggcattgccgccgctgggctagaccgactatttaaa
ccgttttcacaagtagatgcatcgaccacacgacgctatggtggcacagggctggggtta
gccatttcacgtcaattagtcgagctcatgggcggcgagattggcgtagaaagcacagtt
gggaagggatcacggttttgggtcacgctgacgttcgatcgcccttccagtgagtctgcg
ttaccgccactggcgatcgccaccccactgcatcggctccggctactggtcgtagacgac
aacgccaccaaccgcaaaattttgcgctatcaggtttctgcctggggcatgtatatggat
gaagctgaaaacgcgatggctgcgctccaggcattgcgggaacatgccagcatgggcatt
ccctacgatatagcggttttggatatgcaaatgccagagatggatggcgagatgctgggc
agccagatcaaggcagatctattactggcgagcacgaagctcatcatgatgtcatccctc
aaccctgggagcagcagtagccagattttagcacaagggttttcggcgtttctggtcaag
cccgttaagcagtcgcgcttgatggactgtatcctgaatgccttaatggatgatccatcg
ccgcgatcgtcccttgctctggcaccgtctgacgcgactcggtttgatgctagctgtttt
gatgaagaaccccctttattggctgccacccttgagcgatcgagcgaacaaacgactgct
acggctcatcgtgcaaccgttgtgcctgctaccacaacaccaacgccgccagccctaacc
tttttgctagtggaggacaatgcggtcaaccagcgcgtcacattaagccagctcaagcat
ttaggctatacagccgatgttgccactgatggtgaagtggcgttacaaatgatgacccag
gcaaactacgacctcgtgctgatggactgccaaatgccgggactggatggctacagcaca
acccgcgaaatccgccgactggaagcagggcaacaacaacaaacggtcattattgcgctc
actgcaaatgcaatgaaagaagaccgcgatcagtgccttgccgctggtatggatgattac
ctgagtaaacccctgcaaaaggatattctggctgccaagctaacccattggagccagata
ctgctggcacggaagcagactgccatcagtgcgccaccacccatccttaacaccagcctt
cagcccttgcctacacaagcaaccctgattgctcaaaccgttaaccaaaatgccttaagc
cacatcattgattggcattatttacatcaactatcagatgataatgaagcgtttgagcgt
gagttactgcatatttttgtcggagatgtaggtaaccatctggcgcaactgaaacgagcg
atcgagcaacgccattttcatgaccttgaacatgctgcccatcatattaagggtgccagt
ggtaacgttggtctagcggcaatgtcggcgatcgcgtctcaatttgaacaagaggcacgt
cacaacgagattcaagacgcagtggagcgcgtcgctaaattacagcaaaccctagacgcg
gttcaactctttctagcaactcagagctaa
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