Stenomitos frigidus: RBJ76_05750
Help
Entry
RBJ76_05750 CDS
T10829
Name
(GenBank) Calx-beta domain-containing protein
Organism
sfri Stenomitos frigidus
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Calx-beta
DUF4347
FG-GAP
FG-GAP_3
W_rich_C
Big_9
Lipoprotein_21
Motif
Other DBs
NCBI-ProteinID:
XHX79436
LinkDB
All DBs
Position
1176810..1181909
Genome browser
AA seq
1699 aa
AA seq
DB search
MPTQITPLSAVSTTDAALSMPLLLQPEVGGLVDPLSVNRPSQSSRSLLFMDGGVADYQML
LAGVSSGTEVHLLDSSQDAVTQITNTLLGRNGISSLHIVSHGEAGGLDFGTGKLNLQELP
EYAAQLQSWSKALTDDADILLYGCNVAQGELGKAFTSILSQLTGADIAASDDLTGGALLG
GNWTLETATGFVESSLAFTSATTDRYAPVLGHSRLIINDVSIVEGDSGTSNAIFTVTQTG
PGSWNVSVNYATVDGTATAGSDYISTSGTLNFGFNETTKTIAVPIVGDSVAEFGETFSVV
LSNAIFGAGGAIGDGTGIGSIGTAITDQTLNEDTPSGAIPFSVNDFNIPSLVLSATSSNQ
GLIADNNLALGGSNDNRTITVTPTANQFGNATITLQASDGVTTTTQTFNVTVVPVNDAPT
LTLSTANSVAYTENSNAVIMDASATVSDIDSTNFDTGTLRANFSVNGTGDDRLIIRNQGT
AAGEIGVSGSAITFGGIQIGTFTGGVGTTPLVVTFNSNSSPDAAQALLRNLAYSNVSEAP
STVDRTLSIVLTDGDGGTSTTANKTINVTAVNDAPTVSAPTAIAVTEDITTSLTGISFAD
VDAGSNPVIATLTVGAGTLAATNGGGVTVGGTATNRTLGGTVTAINSFIAGNNLTYTTAL
NATTAQTLSVSLNDNGNTGTGGALTSAVNVALNVTAVNDAPTVVAPGAIAILEDTVTALT
GITFADVDAGNNPVIATLTVGAGTLAATSDGSVTVGGTATSRTLSGTLTAINSFIAASNV
TYIPVPDSVATQTLSVSLNDNGNIGTGGSLSSGVTNISLNVTAVNDAPSFTKGSDQTITA
GAGVQTIANWATGFNPGPADEATQTVQAYVVTVDNTAIFAVPPTIDLAGNLIYTPATSLA
TAATATISVSVRDSGGTANGGTDTSAVQTFTITVKPQPTISVAADSQDEGNSGTTAYTFT
VNLSDTSTQEVRVNYATADGTATFADNDYTEASGTLIFAPGETSKTFTVNGSGDNKYENT
EVFLVNLSNAINGAIDAGSNSVNGTIVNDDSIPVVNITPTLTQAEGNSGTTPYVFTVTLS
NPSFEAIGINYSTSDGTATVADGDYIAATGTVNFAPGETSKTITVNAIGDTKFEPNETFQ
VALTGAAANSGAVSLGSAITASSTITNDDAQPTISIGNVSQTEGNSGTTPYTFTVSLSNA
STQTVAVNYTTADGTATVADSDYAVASGTLSFAPGETSKTITVLVNGDTKFEADQVFSVA
LSNASNGTLGTSTGTGTIVNDDTRPTISINSVSQTEGNIGTTPYAFTASLSNASDETVTV
NYATANGTATLAGNDYTVTSGTVTFTPGVTSQTVTVLGNGDSLIEATETFLVNLTAPTNG
TIALGAGTGTGTIVNDDAATLLWRSGTTGTAPTGTGENAVWQLNNFTLQSSYFMPTLADL
NWQVISTADFDRDGDADILWRNRSTGENAIWQMNSTGYQTGYFLTTVADLNWRLLDTGDF
NGDGTADLVWRNQATGQNAIWQMNNFSVQTTALITTVADTNWQIVSTADFDNDRKTDLLW
RNRVTGENAIWQMDGLTTKSSFLITTVADTNWQVAGTADLNSDGIADLVWRNRVTGENAL
WQMNTTGLQTSSLITAVSDSNWQIAGVADLGGDSTPDLLWRNATTTQTAIWQLSSFSFLQ
SYLLPNVPTEWSVRPFTIV
NT seq
5100 nt
NT seq
+upstream
nt +downstream
nt
atgcctactcaaattacgcctttgtctgctgtctctacgactgatgctgctctttcgatg
cccttgttgcttcagcctgaggtcggtgggttagttgacccactcagtgtgaatcgcccg
tctcagtcaagccgatcgctgctctttatggatggcggggtcgcagattatcaaatgctg
ttagcaggagtgtcttcgggcaccgaagtgcatcttctggactctagccaggatgccgtt
acccaaattacgaacacgcttctagggcgaaacggcatctctagcctgcacattgtctct
catggggaagcaggcgggctagacttcggtacaggtaagctgaacttgcaggaattacca
gagtacgccgctcagttgcagagttggagtaaggcactgacggatgatgccgacattttg
ctgtatggctgtaatgtggcacagggcgaactgggcaaagcctttaccagcatcctcagc
cagttaaccggagccgatatcgctgcatccgatgacctgacaggtggagcattactggga
ggaaactggacgctagaaacagcaactggttttgtagagtcatcgttggcatttacctca
gcaacaacagacagatatgcgcccgtcttaggtcattctaggctcattattaacgatgtc
tcgattgttgaaggagatagtggtactagcaacgctatttttacagtaacccaaactgga
cctggatcctggaacgttagtgtcaactacgcaactgtagacggtacggctacggcagga
tctgactacattagtaccagtggtactctaaacttcggtttcaacgaaacgacgaaaaca
attgcagtgcccatcgttggcgatagcgttgctgagtttggtgaaacattctctgttgtg
cttagcaacgctatctttggcgcagggggtgctataggagatggcactggcatcggatct
attggcactgctatcacagaccaaactctcaatgaagacacgccctctggagcaattcct
ttcagtgtcaatgacttcaatattcccagccttgtattatcagcgacttccagtaatcag
ggtttaattgctgataataatcttgctctgggcggttctaatgataatcggacaattact
gttaccccaacggcaaaccaatttggtaatgccacaatcacgcttcaagctagtgatggt
gtcactacaaccacgcaaacctttaatgtgactgtcgtcccggttaatgatgctcctaca
cttaccctatctacggcaaacagcgttgcctataccgaaaatagcaatgccgtgataatg
gatgccagtgccacagtcagcgacattgattccaccaactttgatacgggcacactgaga
gctaatttcagcgtgaatggtacaggcgacgatagactcattattcgcaaccagggcacg
gctgctggtgaaattggcgtttcgggtagcgctatcacgttcggtggtatccaaattggt
acttttacaggtggggtgggcacaacaccattagtcgtcaccttcaacagcaattctagc
cctgacgctgctcaggcattacttcgtaaccttgcttacagcaacgtgtctgaggctcct
tcaaccgtcgatcgtaccttaagcattgtgctaacggatggcgatggtggcaccagcacg
actgctaacaaaaccattaatgtcaccgccgttaacgatgcacctacggtctcggctcca
accgcgatcgctgttacggaagacattaccacctcactgactggcatttcgttcgccgat
gtggatgcgggtagtaatcccgtcatcgcaaccttaactgttggcgctggcactctggca
gcgactaatggtggtggcgtgacggtcggcggcaccgcaacaaaccgtacccttggcggc
actgttacagctatcaacagtttcattgctgggaataatctcacctacactacagccctt
aatgccactactgctcaaacgctgagtgtcagcctcaatgacaatggcaatacgggtact
ggtggggcactcacttcggctgtcaacgtggcgctgaacgtaaccgcggtcaacgatgca
cccaccgtcgtcgctccaggtgcaatcgccatcttagaagacaccgttaccgcactgaca
ggcatcacgttcgccgatgtggatgcgggtaacaaccccgtcatagcaaccttaaccgtt
ggtgctggcaccctggcagcgacttctgatggtagtgtgacagtcggcggcactgctaca
agccgtacccttagcggcacccttacagccatcaacagttttattgccgctagtaatgtc
acttacattccagtccctgattctgtagcgactcaaacgctgagtgtcagcctcaatgac
aacggtaatatcggcacaggtggctcactgtcttcaggcgtaacgaacattagtctcaac
gtaaccgctgtcaatgatgcaccatcatttaccaaaggctctgaccagaccatcacagcc
ggggcgggtgtccaaacgatcgctaactgggcaacaggctttaatccgggtcctgccgac
gaagccactcaaaccgtgcaagcgtatgtcgtgaccgtggacaacacggctatctttgcc
gtcccacccacgatcgatctcgctggcaacctcatctatacgcctgccacgagccttgcc
actgctgcaaccgctaccatcagcgtgagtgtgcgtgacagcggtggcactgccaacggc
ggcactgatacctctgctgtgcaaaccttcacgattaccgtcaagccccagcccacgatc
agcgtcgcggcagacagccaggacgaaggtaacagcggcacgactgcctataccttcacc
gtcaacctgagcgacaccagcactcaggaagtgcgcgtcaactatgccacagcggacggc
accgcaacgtttgcagataatgactacacagaagcatccggcacgcttatctttgcccct
ggtgagaccagcaaaaccttcaccgtcaacggcagcggtgataacaagtatgagaacacc
gaagtcttcctggtaaatctctcaaatgccatcaatggcgcgatcgacgctggcagcaac
agcgtcaacggcacgatcgttaacgatgacagcatacccgtggtgaacatcacacccacc
ctcacccaggctgaaggcaacagcggcaccaccccatatgttttcaccgtcacactctca
aatcccagttttgaggcgatcggcatcaactacagtacaagtgatggcactgccaccgtt
gccgatggcgactatattgctgccactggcaccgtcaactttgcccctggtgaaacgagc
aaaacgatcaccgtcaatgccatcggcgacaccaaatttgagccgaatgaaaccttccag
gtcgctctgacgggcgcagcggctaattctggtgccgttagtcttggtagtgcgatcacc
gctagcagcaccattaccaacgacgatgcacagccgaccatcagcattggcaacgtcagc
cagaccgaaggcaacagcggcaccactccctataccttcacggtcagcctttccaatgcc
agtactcaaaccgttgcggttaactacactaccgctgatggcactgccacggtagctgat
agcgactatgcagtggcttctggcaccctcagctttgcccctggtgagaccagcaaaaca
atcaccgttctggtcaacggtgacaccaagtttgaagctgaccaagtctttagcgttgcg
ttaagcaatgccagcaacggcactctgggcaccagcactggaacaggcacgatcgtcaat
gacgacacccgccctaccattagcatcaacagcgtcagtcagactgaaggcaatattggc
accacgccgtatgcctttactgccagtctctctaatgccagcgatgaaacggtcaccgtc
aactatgccactgccaacggcaccgcaacacttgcaggcaatgactacacagttacgtct
ggtacagtcacctttacgcctggtgtcaccagccaaaccgtcactgtgcttggtaatggc
gacagtctcatcgaagccaccgaaaccttcctggtgaatcttacagctccgaccaatggg
acgatcgcccttggcgcgggtacaggcacaggcacgatcgtcaacgatgatgctgccacc
ctcctgtggcgtagtggcaccactggcaccgctcccacaggcacaggtgaaaatgccgtc
tggcaactgaataacttcacgcttcagagcagctacttcatgccgactctggctgacctc
aactggcaggtcatcagcaccgccgacttcgatcgcgatggcgacgctgacatcctctgg
cgcaaccgctctaccggcgagaatgcgatctggcagatgaacagcacgggctaccaaacg
ggctacttcctgacgacagtcgccgatttgaactggcgtctcctagacacgggcgacttc
aatggggatgggacggctgacctcgtgtggcggaatcaggctacaggtcaaaatgccatt
tggcagatgaacaactttagcgtccaaacgaccgccttgattacgaccgtcgccgatacc
aactggcagattgtcagtaccgctgattttgacaacgacaggaagacggacctcctctgg
cgcaatcgggtcacgggcgagaatgcgatctggcaaatggatgggttgacgaccaagagc
agctttctcattaccacagtggcagatactaactggcaggtggcaggcacggcggactta
aatagtgacgggattgccgacctcgtgtggcgcaatcgggtcacgggtgagaatgccctt
tggcagatgaacaccactggtttacaaaccagtagcctgatcacagctgtctctgactcg
aattggcagattgcaggtgtggctgacttaggcggtgacagtacgcctgacctcctctgg
cgcaatgcgacgacgacgcaaaccgccatctggcaactgagtagcttcagtttcctgcaa
tcgtatctcctccctaacgtgccgactgagtggagcgtcagaccgttcacgatcgtctaa
DBGET
integrated database retrieval system
