Stenomitos frigidus: RBJ76_11155
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Entry
RBJ76_11155 CDS
T10829
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
sfri Stenomitos frigidus
Brite
KEGG Orthology (KO) [BR:
sfri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sfri03032
]
RBJ76_11155
03036 Chromosome and associated proteins [BR:
sfri03036
]
RBJ76_11155
03400 DNA repair and recombination proteins [BR:
sfri03400
]
RBJ76_11155
DNA replication proteins [BR:
sfri03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
RBJ76_11155
Chromosome and associated proteins [BR:
sfri03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
RBJ76_11155
DNA repair and recombination proteins [BR:
sfri03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
RBJ76_11155
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
XHX80454
LinkDB
All DBs
Position
complement(2382591..2382872)
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AA seq
93 aa
AA seq
DB search
MNKGELIDQIAAKADVTKKDADSVLTAILEVILDAVAAGDKVTLVGFGTFEARDRQAREG
RNPSTGKPIQIPATRVPAFSAGKVFKEKVLEKV
NT seq
282 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaaggtgaactcattgatcaaattgcggcaaaagctgatgtcaccaaaaaagat
gctgactctgtactaacagctattctagaagtaatcctcgacgcagtagcggctggtgat
aaagtgacgctggttggctttggcacctttgaagcccgcgatcgacaagcgcgggaaggt
cgtaacccttcgacaggcaaaccaatccaaattccagcaacccgagtaccggctttcagc
gctggtaaggtctttaaagagaaggtgcttgagaaggtttaa
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